Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 MIR128-1-201ENST00000384921 82 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 NPM1P38-201ENST00000403835 865 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 RN7SKP53-201ENST00000411337 315 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 OR4K6P-201ENST00000416478 897 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 DPY19L1P2-201ENST00000426647 915 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AL035458.1-201ENST00000433096 585 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 ATP5HP2-201ENST00000433885 485 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AC005019.1-201ENST00000436455 431 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AC104849.1-201ENST00000462623 405 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 RN7SL601P-201ENST00000471221 293 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 UBA52P3-201ENST00000491303 382 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AC006960.3-201ENST00000561845 705 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 RNU6-1279P-201ENST00000383917 103 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AC017079.2-201ENST00000416102 485 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 Z75741.1-201ENST00000446793 314 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AC010655.1-201ENST00000449336 292 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 SNORD105B-201ENST00000458770 79 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AC011816.2-201ENST00000607089 556 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AC069209.1-201ENST00000619282 651 ntBASIC4.7□□□□□ -1.66
SCN11AQ9UI33 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCN11AQ9UI33 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 RNA5SP197-201ENST00000363357 119 ntBASIC4.69□□□□□ -1.66
SCN11AQ9UI33 SNORD17-201ENST00000390930 237 ntBASIC4.69□□□□□ -1.66
SCN11AQ9UI33 SETP15-201ENST00000412724 337 ntBASIC4.69□□□□□ -1.66
SCN11AQ9UI33 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 AC236972.1-201ENST00000433225 199 ntBASIC4.69□□□□□ -1.66
SCN11AQ9UI33 AC073063.1-201ENST00000434352 607 ntBASIC4.69□□□□□ -1.66
SCN11AQ9UI33 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 AC012493.2-201ENST00000595083 291 ntBASIC4.69□□□□□ -1.66
SCN11AQ9UI33 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 AL354976.1-201ENST00000613843 387 ntBASIC4.69□□□□□ -1.66
SCN11AQ9UI33 U4.6-201ENST00000621618 127 ntBASIC4.69□□□□□ -1.66
SCN11AQ9UI33 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.69□□□□□ -1.66
SCN11AQ9UI33 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AL158156.1-201ENST00000422509 473 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 OSTCP5-201ENST00000425293 453 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 RBMY2UP-201ENST00000453474 324 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 RPS29P2-201ENST00000479278 136 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC025518.1-201ENST00000479856 347 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC139783.2-201ENST00000504847 1145 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 IGHV3-63-201ENST00000518422 341 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC006077.1-201ENST00000604746 343 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 HLFP1-201ENST00000402375 499 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC096638.2-201ENST00000434965 711 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 SEPT14P1-201ENST00000458703 648 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms