Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL139099.1-201ENST00000497398 403 ntBASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 MIR5187-201ENST00000583479 76 ntBASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 AL591424.2-201ENST00000617023 128 ntBASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.19□□□□□ -1.58
NPC1L1Q9UHC9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 SNORA63.1-201ENST00000362493 131 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 HLFP1-201ENST00000402375 499 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 SNORA3.3-201ENST00000408712 125 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 AC069157.1-201ENST00000421749 137 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 AL591419.1-201ENST00000427423 339 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 RPL23AP83-201ENST00000434984 473 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 SNORA71B-202ENST00000439232 272 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 AC107015.1-201ENST00000466902 747 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 OR52A4P-203ENST00000498233 1014 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 AC108941.1-201ENST00000502853 530 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 MTATP6P25-201ENST00000574491 261 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 MIR5685-201ENST00000579080 79 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 AC069200.1-201ENST00000609511 323 ntBASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
NPC1L1Q9UHC9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 RPS3AP25-201ENST00000411660 793 ntBASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 AL035246.1-201ENST00000433554 1255 ntBASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 AL451050.1-201ENST00000450126 415 ntBASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 MTND6P32-201ENST00000457611 483 ntBASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 RNU6-775P-201ENST00000459318 96 ntBASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 AC026726.1-201ENST00000512859 601 ntBASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 RN7SKP141-201ENST00000516167 338 ntBASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 IGKV2-23-201ENST00000518729 323 ntBASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 AC018442.3-201ENST00000523025 183 ntBASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 RMST_9.1-201ENST00000619945 193 ntBASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPC1L1Q9UHC9 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 OR52B1P-201ENST00000316506 909 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 RNA5SP124-201ENST00000362739 110 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 RNU6-891P-201ENST00000384280 111 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AC009237.5-201ENST00000414271 501 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 OR4F13P-201ENST00000428478 931 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 YME1L1P1-201ENST00000429435 297 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 YWHAEP5-201ENST00000431545 765 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 NOTCH2P1-201ENST00000443481 624 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 PRSS3P4-201ENST00000453323 162 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AL121877.1-201ENST00000453704 622 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 RNA5SP208-201ENST00000516156 78 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AC009303.3-201ENST00000591103 736 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AC068790.5-201ENST00000602741 355 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AC112230.1-201ENST00000604342 547 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AL049634.3-201ENST00000604968 457 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AC005344.1-201ENST00000613391 459 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 AL356121.2-201ENST00000624715 780 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 FAM91A3P-201ENST00000456826 2544 ntBASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
NPC1L1Q9UHC9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms