Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 OR5BE1P-202ENST00000641168 1176 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AC006504.1-201ENST00000562493 3666 ntBASIC3.72□□□□□ -1.81
VAPAQ9P0L0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VAPAQ9P0L0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
VAPAQ9P0L0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 MIR192-201ENST00000384915 110 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 MIR323B-201ENST00000385269 82 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 HLFP1-201ENST00000402375 499 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 RN7SKP33-201ENST00000410942 340 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AL772161.1-201ENST00000439130 476 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 NDUFA12P1-201ENST00000455914 406 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 OR7L1P-201ENST00000456181 380 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 RN7SL860P-201ENST00000473738 223 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC091167.1-201ENST00000492017 396 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 USP9YP5-201ENST00000511770 630 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC117525.1-201ENST00000515228 503 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AL133457.1-201ENST00000564251 987 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC244505.7-201ENST00000599675 272 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 BRDTP1-201ENST00000605735 677 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC243654.2-201ENST00000612843 443 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 MIR8059-201ENST00000620427 81 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AP000346.3-201ENST00000622821 210 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC011944.2-201ENST00000624440 683 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 MIR3653-201ENST00000625572 110 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AL355480.1-201ENST00000629041 99 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 ATE1-AS1-202ENST00000636460 506 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC012618.3-205ENST00000637896 1496 ntBASIC3.71□□□□□ -1.82
VAPAQ9P0L0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VAPAQ9P0L0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AL359715.4-201ENST00000606629 1436 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 RPL21P109-201ENST00000422213 475 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC023141.6-201ENST00000429418 337 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 NDUFA5P10-201ENST00000432147 357 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 ARL5AP3-201ENST00000439327 386 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 RANP8-201ENST00000444720 713 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AL132838.2-201ENST00000492041 314 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 MTCO3P42-201ENST00000509488 518 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 MTCO3P39-201ENST00000514812 518 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 SNORA70.14-201ENST00000516205 110 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC087369.1-201ENST00000520775 996 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 CYCSP29-201ENST00000533731 318 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC092868.3-201ENST00000560515 784 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC234771.5-201ENST00000600161 514 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AL713922.2-201ENST00000619384 716 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC010608.2-201ENST00000624830 470 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC096656.1-201ENST00000623826 1364 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AL136964.1-201ENST00000622038 2990 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 AC090229.1-201ENST00000590983 1609 ntBASIC3.7□□□□□ -1.82
VAPAQ9P0L0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VAPAQ9P0L0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms