Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC010342.1-201ENST00000514047 877 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 RN7SKP141-201ENST00000516167 338 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AL109766.1-201ENST00000555080 552 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AL049838.1-201ENST00000563647 981 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 RN7SL622P-201ENST00000585292 275 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC069431.2-201ENST00000604149 1099 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 SUMO2P15-201ENST00000604285 278 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC124016.2-201ENST00000610058 665 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC091046.2-201ENST00000620775 665 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 OR2L1P-202ENST00000641567 1023 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC114546.3-201ENST00000623582 1734 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 MFSD8-213ENST00000641134 1327 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 AC073429.2-201ENST00000569694 1444 ntBASIC4.11□□□□□ -1.75
NDE1Q9NXR1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
NDE1Q9NXR1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 SNORD56.4-201ENST00000363883 71 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 RNU6-207P-201ENST00000384137 107 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 RNU6-532P-201ENST00000384318 107 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 RNU1-106P-201ENST00000384382 164 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 RN7SKP100-201ENST00000411258 284 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC241520.1-201ENST00000422654 1099 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 DEFB130D-201ENST00000426866 237 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AP001324.1-201ENST00000428553 399 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC114973.1-201ENST00000429057 632 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC011742.1-201ENST00000431448 434 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AL035458.1-201ENST00000433096 585 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 MTND2P2-201ENST00000434633 945 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AL627308.1-201ENST00000435693 821 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC037198.2-201ENST00000478845 733 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 UBE2V1P12-201ENST00000503954 474 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 HAUS1P1-201ENST00000505275 832 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC006499.3-201ENST00000506077 748 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 SNORA19.3-201ENST00000516165 130 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 IGKV2-38-201ENST00000517443 247 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AP001372.4-201ENST00000524889 472 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC063950.1-201ENST00000552036 308 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AL158211.1-201ENST00000566763 763 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 MIR6853-201ENST00000619642 74 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 MIR6719-201ENST00000622428 87 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AP002799.1-201ENST00000623552 423 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC090506.2-201ENST00000624521 419 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AP005264.7-201ENST00000625003 745 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.1□□□□□ -1.75
NDE1Q9NXR1 SPATA2P1-201ENST00000431223 2055 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 INTS6P1-201ENST00000504674 2530 ntBASIC4.1□□□□□ -1.75
NDE1Q9NXR1 AL356489.2-201ENST00000566968 3528 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AL592437.2-201ENST00000421655 2434 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 RNA5SP305-201ENST00000362665 119 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 RNU5B-4P-201ENST00000363508 111 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 RNA5SP175-201ENST00000364275 119 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 MIR142-201ENST00000384835 87 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.09□□□□□ -1.75
NDE1Q9NXR1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.09□□□□□ -1.75
NDE1Q9NXR1 AC019050.1-201ENST00000418508 492 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms