Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 RPL23AP12-201ENST00000467573 473 ntBASIC3.56□□□□□ -1.84
CHD8Q9HCK8 AC128713.1-201ENST00000471495 306 ntBASIC3.56□□□□□ -1.84
CHD8Q9HCK8 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.56□□□□□ -1.84
CHD8Q9HCK8 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.56□□□□□ -1.84
CHD8Q9HCK8 AC092747.2-201ENST00000545069 983 ntBASIC3.56□□□□□ -1.84
CHD8Q9HCK8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 RNA5SP197-201ENST00000363357 119 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 EI24P3-201ENST00000399046 1062 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AL358913.1-201ENST00000554342 121 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AC093388.1-201ENST00000609166 430 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 RN7SKP186-201ENST00000365371 303 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 SNORD96B-201ENST00000386148 79 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 OR1AA1P-201ENST00000419597 916 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 BX890604.2-201ENST00000427883 474 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 RPL21P91-201ENST00000429231 479 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 ATP5JP1-201ENST00000431631 322 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AC090686.1-201ENST00000481577 749 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AC093663.1-201ENST00000497190 394 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AC130352.1-201ENST00000602979 661 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC3.55□□□□□ -1.84
CHD8Q9HCK8 AC091905.2-201ENST00000623143 306 ntBASIC3.55□□□□□ -1.84
CHD8Q9HCK8 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 TPTE2P3-201ENST00000441562 1189 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AC026784.1-201ENST00000507986 352 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AC006349.1-201ENST00000555526 235 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AC073657.2-201ENST00000605661 303 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 MIR432-201ENST00000606207 94 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 MAPK10-303ENST00000641324 3959 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 SAMMSON-213ENST00000641336 1521 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 HCFC2P1-201ENST00000392864 1592 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AC007823.1-201ENST00000569932 1566 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AL080315.1-201ENST00000406055 466 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AL121878.1-201ENST00000418638 859 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 EEF1B2P7-201ENST00000451177 676 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AL049874.2-201ENST00000492636 288 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 PCBP2P3-201ENST00000509726 843 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 CASC19-203ENST00000523510 575 ntTSL 3 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AC090337.1-201ENST00000579651 2074 ntBASIC3.54□□□□□ -1.84
CHD8Q9HCK8 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.54□□□□□ -1.84
CHD8Q9HCK8 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHD8Q9HCK8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.53□□□□□ -1.84
CHD8Q9HCK8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CHD8Q9HCK8 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CHD8Q9HCK8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHD8Q9HCK8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHD8Q9HCK8 AC010740.1-201ENST00000417035 684 ntBASIC3.53□□□□□ -1.84
CHD8Q9HCK8 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.53□□□□□ -1.84
CHD8Q9HCK8 AC083863.1-201ENST00000438811 231 ntBASIC3.53□□□□□ -1.84
CHD8Q9HCK8 CYCSP24-201ENST00000445119 316 ntBASIC3.53□□□□□ -1.84
CHD8Q9HCK8 BNIP3P41-201ENST00000503774 571 ntBASIC3.53□□□□□ -1.84
CHD8Q9HCK8 EEF1A1P37-201ENST00000522748 715 ntBASIC3.53□□□□□ -1.84
CHD8Q9HCK8 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC3.53□□□□□ -1.84
CHD8Q9HCK8 AC067852.4-201ENST00000590314 478 ntBASIC3.53□□□□□ -1.84
CHD8Q9HCK8 AL451044.1-201ENST00000604867 238 ntBASIC3.53□□□□□ -1.84
CHD8Q9HCK8 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
CHD8Q9HCK8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms