Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 DHX40P1-201ENST00000588725 1412 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 AC053481.2-202ENST00000582394 1500 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDH9Q9HC56 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.6□□□□□ -1.67
PCDH9Q9HC56 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 GSTM3P2-201ENST00000412746 530 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 BTF3P8-201ENST00000414577 526 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC119751.6-201ENST00000416712 186 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 MTND4P3-201ENST00000417829 541 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AL358176.3-201ENST00000420757 454 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 XKRYP1-201ENST00000423438 492 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 XKRYP2-201ENST00000432915 492 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 GTF2IP3-201ENST00000433887 494 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 VN1R25P-201ENST00000443385 738 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 GEMIN8P3-201ENST00000445417 720 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 SEPT14P24-201ENST00000447236 180 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC012671.1-201ENST00000451912 203 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC096992.1-201ENST00000459808 709 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 RPS29P22-201ENST00000472363 168 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC079203.1-201ENST00000487972 404 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC008837.1-201ENST00000511513 412 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC112673.1-201ENST00000513168 575 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 BX005019.1-201ENST00000561881 1810 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC069061.3-201ENST00000582254 823 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 MIR548Y-201ENST00000582739 110 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AL160290.3-201ENST00000604869 165 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 Z98200.1-201ENST00000607298 470 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AC090948.2-201ENST00000607363 564 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AL355578.1-201ENST00000607405 1328 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AL133243.1-201ENST00000614487 366 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AL121890.3-201ENST00000618494 516 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 AL023881.1-201ENST00000621088 301 ntBASIC4.59□□□□□ -1.67
PCDH9Q9HC56 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
PCDH9Q9HC56 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDH9Q9HC56 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
PCDH9Q9HC56 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDH9Q9HC56 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDH9Q9HC56 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
PCDH9Q9HC56 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
PCDH9Q9HC56 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC099786.3-201ENST00000565735 1410 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 RNA5SP505-201ENST00000364748 108 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 SNORD116-12-201ENST00000384468 92 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 MIR320B1-201ENST00000390209 79 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 RN7SKP222-201ENST00000410651 315 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC069213.2-201ENST00000420238 366 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 UQCRBP1-201ENST00000421129 336 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC099336.2-201ENST00000422457 254 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AL158073.1-201ENST00000426848 1104 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 RPS12P10-201ENST00000427031 377 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms