Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MTCO3P31-201ENST00000405526 789 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 OR2X1P-201ENST00000421144 687 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 RPL7P57-201ENST00000423238 740 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AL645608.4-201ENST00000423619 154 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC007559.1-201ENST00000428736 355 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 MTCO1P54-201ENST00000430139 712 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 B3GNT2P1-201ENST00000434960 952 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 NANOGP2-201ENST00000435391 727 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 YWHAZP8-201ENST00000436935 731 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 CR769776.1-201ENST00000441254 787 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 CEACAMP7-201ENST00000444105 496 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC112498.1-201ENST00000444401 332 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AL034418.1-201ENST00000448675 860 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC234781.3-201ENST00000452540 973 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AURKAPS2-201ENST00000454983 333 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 RPS5P7-201ENST00000456664 608 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 NF1P3-201ENST00000457709 450 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 PNPLA4P1-201ENST00000458328 305 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 RN7SL346P-201ENST00000491561 294 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC025674.1-201ENST00000507074 324 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 ARL2BPP5-201ENST00000523141 481 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC079075.1-201ENST00000559543 878 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 EIF5A2P1-201ENST00000564027 460 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC093249.4-201ENST00000564755 259 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC093519.1-201ENST00000566109 298 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AL158211.1-201ENST00000566763 763 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC015688.2-201ENST00000584523 262 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC022726.1-201ENST00000587475 207 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 CCDC58P3-201ENST00000590792 430 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC011487.3-201ENST00000593607 453 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC022022.2-201ENST00000602989 360 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC087683.2-201ENST00000611384 326 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 MIR6729-201ENST00000618194 65 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC000123.2-201ENST00000623124 461 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 MAPK10-320ENST00000641462 6696 ntBASIC4.58□□□□□ -1.68
BRF2Q9HAW0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
BRF2Q9HAW0 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 MFSD8-220ENST00000641243 1422 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 U3.30-201ENST00000391308 210 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 HMGB3P5-201ENST00000428894 612 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 IFNNP1-201ENST00000429219 553 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 GTF2IP7-202ENST00000436677 309 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 USP9YP22-201ENST00000438971 294 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 ELOCP13-201ENST00000443934 329 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AL591719.1-201ENST00000444669 744 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 NDUFA5P7-201ENST00000452914 242 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 snoU13.7-201ENST00000459220 104 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 RN7SL629P-201ENST00000489622 285 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC104971.1-201ENST00000495117 578 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 EEF1A1P37-201ENST00000522748 715 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 PTP4A1P6-201ENST00000531034 478 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 GCSHP4-201ENST00000538792 439 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.57□□□□□ -1.68
BRF2Q9HAW0 MTCYBP27-201ENST00000555160 670 ntBASIC4.57□□□□□ -1.68
BRF2Q9HAW0 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms