Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RPS24P12-201ENST00000402084 394 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 RN7SKP29-201ENST00000410957 272 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 BOLA3P4-201ENST00000418151 400 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 MTCO1P20-201ENST00000425366 358 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 RPL23AP4-201ENST00000427757 463 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AL389925.1-201ENST00000432257 728 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 CLUHP1-201ENST00000435012 1190 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 RPL37P21-201ENST00000435890 276 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 TXNP5-201ENST00000441043 315 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 RPL18AP17-201ENST00000455326 198 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 BX322784.1-201ENST00000455793 1077 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 OR52A4P-201ENST00000472867 958 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC105384.2-201ENST00000508433 640 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 LRRC34P2-201ENST00000514850 553 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 MTCO1P30-201ENST00000515244 580 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 RNA5SP271-201ENST00000516700 88 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 SLC2A13P1-201ENST00000531560 322 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC008083.2-201ENST00000546707 476 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 MIR4260-201ENST00000583107 67 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 PRELID3BP8-201ENST00000604148 295 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC008277.2-201ENST00000605196 797 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC008115.3-201ENST00000614874 549 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC136475.10-201ENST00000620253 385 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AP000550.3-201ENST00000637734 379 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC024614.3-201ENST00000637860 256 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 CYP1D1P-201ENST00000416662 1433 ntBASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SEC61A2Q9H9S3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 RNA5SP510-201ENST00000364697 99 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 Y_RNA.356-201ENST00000365475 113 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 U8.14-201ENST00000390843 143 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 RNA5SP91-201ENST00000390902 119 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 OR7E101P-201ENST00000400428 513 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 RNU4-55P-201ENST00000410731 137 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AL136133.1-201ENST00000413694 376 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 MRPL53P1-201ENST00000414323 319 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AL513174.1-201ENST00000423182 629 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 RPS27AP6-201ENST00000427962 448 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC093019.1-201ENST00000443135 252 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 OR7E116P-201ENST00000448529 957 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC011476.1-201ENST00000466725 307 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 RBM43P1-201ENST00000476891 1081 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC018710.1-201ENST00000506509 158 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 AC024589.1-201ENST00000512207 263 ntBASIC5.11□□□□□ -1.59
SEC61A2Q9H9S3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms