Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 ABCF2P2-201ENST00000450549 296 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 AL136097.1-201ENST00000456945 913 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 AC053481.1-201ENST00000467217 306 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM4Q9C037 DUX4L52-201ENST00000549363 777 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 MIR3200-201ENST00000580767 85 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 AP001160.4-201ENST00000596971 382 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 AC099669.2-201ENST00000616549 437 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 AL713922.2-201ENST00000619384 716 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 AC012314.7-201ENST00000619693 93 ntBASIC4.14□□□□□ -1.75
TRIM4Q9C037 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM4Q9C037 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM4Q9C037 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM4Q9C037 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC008033.1-201ENST00000216407 1162 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM4Q9C037 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
TRIM4Q9C037 SNORA9-201ENST00000384215 133 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 RPS27AP11-201ENST00000402798 447 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 MIR1911-201ENST00000410783 80 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 RPL21P89-201ENST00000444021 467 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 DHFRP3-201ENST00000455595 559 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 RPS27AP17-201ENST00000463344 455 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC010342.1-201ENST00000514047 877 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 OR5BC1P-201ENST00000529327 739 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 RN7SL703P-201ENST00000578485 302 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 MIR3124-201ENST00000582636 67 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 SRGNP1-201ENST00000603392 451 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 MIR6867-201ENST00000610636 67 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC018816.2-201ENST00000621460 353 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 CDRT1-208ENST00000630868 794 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 MTCO1P14-201ENST00000441695 1559 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.13□□□□□ -1.75
TRIM4Q9C037 PHKBP1-201ENST00000450951 1951 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 BDP1P-201ENST00000582658 1990 ntBASIC4.13□□□□□ -1.75
TRIM4Q9C037 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM4Q9C037 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM4Q9C037 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM4Q9C037 MIR7-3-201ENST00000384898 110 ntBASIC4.12□□□□□ -1.75
TRIM4Q9C037 SNORD66.1-201ENST00000391230 76 ntBASIC4.12□□□□□ -1.75
TRIM4Q9C037 AC097374.1-203ENST00000400783 485 ntBASIC4.12□□□□□ -1.75
TRIM4Q9C037 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM4Q9C037 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 AC022431.1-201ENST00000450941 438 ntBASIC4.12□□□□□ -1.75
TRIM4Q9C037 AC243772.1-201ENST00000451620 410 ntBASIC4.12□□□□□ -1.75
TRIM4Q9C037 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 PHBP17-201ENST00000528576 541 ntBASIC4.12□□□□□ -1.75
TRIM4Q9C037 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 AC079587.1-201ENST00000603846 277 ntBASIC4.12□□□□□ -1.75
TRIM4Q9C037 AC010680.3-201ENST00000604215 520 ntBASIC4.12□□□□□ -1.75
TRIM4Q9C037 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM4Q9C037 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM4Q9C037 LINC01808-202ENST00000641680 1116 ntBASIC4.12□□□□□ -1.75
TRIM4Q9C037 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM4Q9C037 MAPK10-373ENST00000641983 6772 ntBASIC4.12□□□□□ -1.75
TRIM4Q9C037 LARP1BP1-201ENST00000506036 1359 ntBASIC4.12□□□□□ -1.75
TRIM4Q9C037 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM4Q9C037 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM4Q9C037 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms