Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RN7SL802P-201ENST00000577858 299 ntBASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 AC006566.1-201ENST00000608943 513 ntBASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 AL589743.7-201ENST00000612637 233 ntBASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 AC127024.6-201ENST00000621598 424 ntBASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 AL049536.1-201ENST00000625043 744 ntBASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 AC130650.2-201ENST00000618736 2403 ntBASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 AL451142.2-201ENST00000429076 2090 ntBASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 AC006378.2-201ENST00000623178 2476 ntBASIC5.81□□□□□ -1.48
TRIM55Q9BYV6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC010266.2-201ENST00000564741 3255 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 SNORA21-201ENST00000362423 132 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 SNORA70.6-201ENST00000383934 134 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 Y_RNA.516-201ENST00000384541 124 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 SSXP10-201ENST00000402595 565 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AL024474.1-201ENST00000404655 591 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 HMGN1P14-201ENST00000412459 517 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AL096829.1-201ENST00000413677 457 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 RPS7P8-201ENST00000418311 581 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 NMD3P2-201ENST00000421815 761 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC010975.2-201ENST00000427781 588 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AL136231.1-201ENST00000429407 730 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 RPL23AP74-201ENST00000437246 471 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AL663074.2-201ENST00000440621 479 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 RPL5P25-201ENST00000441148 775 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AL357520.1-201ENST00000441557 453 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 RPL7P31-201ENST00000450192 724 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 SNRPFP4-201ENST00000456366 242 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 ACA64.1-201ENST00000459171 127 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC104164.1-201ENST00000460282 590 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 MTND6P6-201ENST00000478031 263 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC006539.1-201ENST00000481419 501 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC083795.1-201ENST00000491760 320 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 RPSAP51-201ENST00000497462 645 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 BNIP3P41-201ENST00000503774 571 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 MIR4716-201ENST00000579628 84 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC108747.1-201ENST00000609508 535 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC138965.3-201ENST00000623875 498 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AL603839.4-201ENST00000624658 1005 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 CRYM-AS1-204ENST00000637983 556 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 AP001284.1-201ENST00000528393 2118 ntBASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM55Q9BYV6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM55Q9BYV6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms