Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 OR13C3-201ENST00000374781 1108 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 RNU6-146P-201ENST00000384602 108 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 MIR3074-201ENST00000384885 81 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 ENSAP1-201ENST00000392855 326 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 ATP5F1P4-201ENST00000397288 746 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 RNU6-603P-201ENST00000411403 107 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 RPL7P4-203ENST00000430239 730 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AL500522.2-201ENST00000448562 343 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC007688.1-201ENST00000475592 759 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 RPS4XP15-201ENST00000489210 795 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC113398.2-201ENST00000507630 558 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC234775.3-201ENST00000564612 656 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC011477.5-201ENST00000586571 259 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 IPO5P1-202ENST00000600039 287 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC025946.2-201ENST00000603398 234 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC067959.1-201ENST00000604334 379 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 MIR486-1-201ENST00000612171 68 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 ZYXP1-201ENST00000617638 118 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AP003400.2-201ENST00000624036 666 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 MIR492-201ENST00000638676 116 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AC008725.1-201ENST00000605123 2263 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AL161912.2-201ENST00000565707 3007 ntBASIC3.6□□□□□ -1.83
RSPO3Q9BXY4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 RNU1-18P-201ENST00000363062 164 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AL136131.1-201ENST00000406079 803 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 MIR1251-201ENST00000408552 70 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 BMS1P19-201ENST00000433925 393 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 SNORA71B-202ENST00000439232 272 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 ELOCP10-201ENST00000440624 327 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC084198.1-201ENST00000477747 402 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 RNA5SP208-201ENST00000516156 78 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC091516.1-201ENST00000549191 703 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC007424.1-203ENST00000554613 687 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC106785.1-201ENST00000565935 262 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 ELOCP34-201ENST00000604436 327 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC138473.1-201ENST00000605717 526 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC009229.4-201ENST00000623854 1947 ntBASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.59□□□□□ -1.83
RSPO3Q9BXY4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RSPO3Q9BXY4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RSPO3Q9BXY4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AL121657.1-201ENST00000327215 531 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms