Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.96□□□□□ -1.62
VRK1Q99986 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
VRK1Q99986 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
VRK1Q99986 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.96□□□□□ -1.62
VRK1Q99986 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
VRK1Q99986 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
VRK1Q99986 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK1Q99986 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 BTBD10P1-201ENST00000549824 1352 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 PABPC1P9-201ENST00000426076 1612 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
VRK1Q99986 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK1Q99986 RNU6-984P-201ENST00000363236 109 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 RNU1-85P-201ENST00000364127 164 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
VRK1Q99986 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VRK1Q99986 SNRPEP2-201ENST00000397592 279 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 DEFB108C-201ENST00000400154 252 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 HMGB1P17-201ENST00000403495 628 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AL512430.2-201ENST00000406786 339 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 RPL31P52-201ENST00000407532 367 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 Y_RNA.619-201ENST00000410951 90 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 RN7SKP293-201ENST00000411389 296 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AC007899.1-201ENST00000412776 775 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AC004022.2-201ENST00000413824 193 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 RPS7P13-201ENST00000413955 498 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 ATG4AP1-201ENST00000416893 538 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 RPS3AP9-201ENST00000417027 792 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 AC092647.1-201ENST00000420654 287 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 AL662874.1-201ENST00000426065 230 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AC127526.2-201ENST00000426436 775 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.95□□□□□ -1.62
VRK1Q99986 AL121776.1-201ENST00000429337 372 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK1Q99986 UBE2V1P3-201ENST00000439651 417 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 RPL23AP16-201ENST00000441715 421 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 USP9YP29-201ENST00000445112 563 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK1Q99986 VN1R10P-201ENST00000447106 875 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AL596266.1-201ENST00000448132 400 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 AC002553.2-201ENST00000453217 340 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 CFTRP1-201ENST00000456646 183 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 AC109458.1-201ENST00000508858 316 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AC026412.2-201ENST00000512270 1075 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 AC018797.3-201ENST00000513388 1241 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.95□□□□□ -1.62
VRK1Q99986 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK1Q99986 AL049872.1-201ENST00000556323 322 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AC018552.3-201ENST00000567416 561 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AP001094.1-201ENST00000579805 193 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.95□□□□□ -1.62
VRK1Q99986 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK1Q99986 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.95□□□□□ -1.62
VRK1Q99986 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK1Q99986 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK1Q99986 DEFB131E-202ENST00000602581 683 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 FO393422.1-201ENST00000603908 708 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AC005191.1-201ENST00000603950 358 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 AC092354.2-201ENST00000607786 514 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AC107214.2-201ENST00000608204 634 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 MIR6133-201ENST00000617057 108 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK1Q99986 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK1Q99986 STX3-208ENST00000641815 3236 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK1Q99986 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK1Q99986 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.95□□□□□ -1.62
VRK1Q99986 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK1Q99986 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VRK1Q99986 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms