Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC003973.3-201ENST00000624863 2822 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC023421.1-201ENST00000590535 1785 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 HSPA8P18-201ENST00000439846 1928 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 RPL23P2-201ENST00000320371 421 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 U8.4-201ENST00000363626 134 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC211486.3-201ENST00000412694 621 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 PAICSP7-201ENST00000419829 962 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC245054.1-201ENST00000420944 258 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AL139421.1-201ENST00000423010 169 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 OR6K4P-201ENST00000423179 955 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AL022400.1-201ENST00000423946 935 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC009784.1-201ENST00000426484 460 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 RPL7AP49-201ENST00000429522 581 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AL591438.1-201ENST00000433508 581 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 CLUHP1-201ENST00000435012 1190 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC009127.1-201ENST00000467090 155 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 GAPDHP36-201ENST00000480688 918 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 RPSAP50-201ENST00000481955 852 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC147055.4-201ENST00000504399 745 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 OR5M14P-201ENST00000506803 618 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 RNU6-506P-201ENST00000516553 94 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AP001207.1-201ENST00000524051 481 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AP000619.3-201ENST00000535634 1127 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC044860.2-201ENST00000561005 179 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 RN7SL708P-201ENST00000580952 299 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC007448.1-201ENST00000582714 234 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AL117336.2-201ENST00000602435 335 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AL159169.3-201ENST00000608871 561 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC010632.3-201ENST00000611377 369 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC010133.1-201ENST00000615809 842 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 MIR7155-201ENST00000615925 56 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 MIR4278-201ENST00000636094 69 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC002525.1-201ENST00000624392 1622 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AC107021.2-201ENST00000567714 2095 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 AL034549.2-201ENST00000618285 3373 ntBASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.47□□□□□ -1.53
CDK5RAP1Q96SZ6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
CDK5RAP1Q96SZ6 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CDK5RAP1Q96SZ6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.46□□□□□ -1.53
CDK5RAP1Q96SZ6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDK5RAP1Q96SZ6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CDK5RAP1Q96SZ6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 RNA5SP305-201ENST00000362665 119 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 SNORA74A-201ENST00000364089 198 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU4-76P-201ENST00000364509 141 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 RNA5SP90-201ENST00000364801 99 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU6-116P-201ENST00000384042 109 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU1-74P-201ENST00000384108 171 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU6-348P-201ENST00000384386 107 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 MIR1182-201ENST00000408363 97 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC009237.5-201ENST00000414271 501 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 DDX39BP1-205ENST00000422507 192 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 MED14P1-201ENST00000430517 648 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 ATP5F1P1-201ENST00000433775 569 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms