Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL358913.1-201ENST00000554342 121 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC015720.2-201ENST00000567709 334 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 MIR4675-201ENST00000577898 77 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 OR4K7P-201ENST00000580232 945 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 OR7E18P-201ENST00000592589 702 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL390816.3-201ENST00000604527 1066 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC006270.3-201ENST00000605967 1036 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL008729.2-201ENST00000606393 473 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 AP004247.3-201ENST00000608682 624 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AL136981.2-201ENST00000617319 734 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 BX005214.3-202ENST00000619809 325 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC132068.1-201ENST00000623805 459 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 AC073429.2-201ENST00000569694 1444 ntBASIC4.78□□□□□ -1.64
SNX18Q96RF0 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX18Q96RF0 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX18Q96RF0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC006210.2-201ENST00000367074 1545 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX18Q96RF0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 ASNSP1-204ENST00000641977 1664 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX18Q96RF0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX18Q96RF0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 RNU6-839P-201ENST00000363347 108 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 SNORA51.12-201ENST00000384448 134 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 Y_RNA.553-201ENST00000384670 102 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX18Q96RF0 RNU2-42P-201ENST00000410697 113 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 TMX2P1-201ENST00000436507 708 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 GAPDHP58-201ENST00000438477 1006 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AL163193.1-201ENST00000444895 788 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 RPL7L1P1-201ENST00000448259 785 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AL445433.1-201ENST00000457507 257 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC112206.1-201ENST00000468416 477 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC100832.1-201ENST00000471945 383 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 SETP11-201ENST00000473027 690 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 RN7SL547P-201ENST00000490793 290 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AL024509.2-201ENST00000493462 493 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AF213884.2-201ENST00000510417 903 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 RNU2-30P-201ENST00000516209 141 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 RNA5SP34-201ENST00000516887 130 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC134698.5-201ENST00000519444 336 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX18Q96RF0 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC006362.1-201ENST00000567392 174 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 MIR1269B-201ENST00000580405 75 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 VN1R84P-201ENST00000593697 235 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC078795.2-201ENST00000602835 1252 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AL137072.1-201ENST00000603444 466 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 AC023421.1-201ENST00000590535 1785 ntBASIC4.77□□□□□ -1.65
SNX18Q96RF0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX18Q96RF0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX18Q96RF0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SNX18Q96RF0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms