Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 OR52A4P-203ENST00000498233 1014 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 PCNAP1-201ENST00000505363 709 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC093824.1-201ENST00000508796 343 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC108471.1-201ENST00000513977 287 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 RNA5SP143-201ENST00000516936 115 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 PARP1P2-201ENST00000556806 195 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC092868.3-201ENST00000560515 784 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC141257.3-201ENST00000572906 215 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC012417.1-201ENST00000582307 1039 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 AL451044.1-201ENST00000604867 238 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC010200.2-201ENST00000605098 235 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC004825.2-201ENST00000616634 455 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 MIR6715B-201ENST00000637172 77 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 AC119674.1-220ENST00000641502 1048 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 OR52H1-202ENST00000641796 1061 ntBASIC3.82□□□□□ -1.8
COL21A1Q96P44 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.82□□□□□ -1.8
COL21A1Q96P44 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL21A1Q96P44 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL21A1Q96P44 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL21A1Q96P44 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL21A1Q96P44 SNORA70.2-201ENST00000364506 135 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC068538.1-201ENST00000376856 336 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 SNORA70C-201ENST00000384538 135 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 RNU6-146P-201ENST00000384602 108 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 RN7SKP33-201ENST00000410942 340 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 RNF19BPX-201ENST00000426224 625 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 XKRYP6-201ENST00000440468 1116 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 XKRYP3-201ENST00000442113 1116 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC006011.1-201ENST00000442758 349 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 VN1R25P-201ENST00000443385 738 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC023512.1-201ENST00000444513 499 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 VN1R40P-201ENST00000455196 941 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 RPL7P1-201ENST00000468161 747 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 RPL7P9-201ENST00000468715 747 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 RN7SL604P-201ENST00000492589 296 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 RPL29P14-201ENST00000495837 428 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 KRT19P6-201ENST00000510983 209 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC010342.1-201ENST00000514047 877 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 RNU7-143P-201ENST00000516781 65 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 NARSP2-201ENST00000518524 679 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC074029.2-201ENST00000551045 634 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC015911.5-201ENST00000587076 451 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 BNIP3P33-201ENST00000598912 569 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AL590392.1-201ENST00000604960 446 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC090948.2-201ENST00000607363 564 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AP000255.1-201ENST00000610276 676 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC090506.2-201ENST00000624521 419 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC010608.2-201ENST00000624830 470 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 AC116667.1-201ENST00000604855 2072 ntBASIC3.81□□□□□ -1.8
COL21A1Q96P44 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL21A1Q96P44 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL21A1Q96P44 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL21A1Q96P44 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL21A1Q96P44 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
COL21A1Q96P44 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 AC096656.1-201ENST00000623826 1364 ntBASIC3.8□□□□□ -1.8
COL21A1Q96P44 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
COL21A1Q96P44 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL21A1Q96P44 SNORD35B-201ENST00000363660 87 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms