Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 ELOCP10-201ENST00000440624 327 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 FTH1P9-201ENST00000513251 355 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 SNORA31.9-201ENST00000516429 84 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 RNA5SP164-201ENST00000516533 110 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC008745.1-201ENST00000604064 271 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 ELOCP34-201ENST00000604436 327 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 AL163642.2-201ENST00000604722 1019 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC116447.1-201ENST00000613153 453 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC079684.1-201ENST00000621405 437 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC090506.2-201ENST00000624521 419 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
CCDC42Q96M95 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC42Q96M95 AP001486.2-201ENST00000561652 5113 ntBASIC4.05□□□□□ -1.76
CCDC42Q96M95 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 TNPO1P3-201ENST00000436471 2662 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 AC022893.2-201ENST00000564832 3296 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 TCEA1P2-201ENST00000420496 906 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 ANP32BP2-201ENST00000454525 545 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 SNRPGP5-201ENST00000456003 220 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 RNU7-170P-201ENST00000459303 61 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 RPS4XP15-201ENST00000489210 795 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 MRPL49P2-201ENST00000521066 465 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 AC022695.1-201ENST00000522089 237 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 SNORA62.6-201ENST00000606322 83 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 AL391261.4-201ENST00000616012 481 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 AF001550.2-201ENST00000636643 217 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 OR52H1-202ENST00000641796 1061 ntBASIC4.04□□□□□ -1.76
CCDC42Q96M95 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
CCDC42Q96M95 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC42Q96M95 AC009313.2-201ENST00000417893 1941 ntBASIC4.03□□□□□ -1.76
CCDC42Q96M95 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC42Q96M95 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 RPL30P2-201ENST00000414021 291 ntBASIC4.03□□□□□ -1.76
CCDC42Q96M95 AL691447.1-201ENST00000419456 387 ntBASIC4.03□□□□□ -1.76
CCDC42Q96M95 AC002075.2-201ENST00000425207 252 ntBASIC4.03□□□□□ -1.76
CCDC42Q96M95 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 AC007537.2-201ENST00000472093 511 ntBASIC4.03□□□□□ -1.76
CCDC42Q96M95 METTL15P1-201ENST00000481421 1045 ntBASIC4.03□□□□□ -1.76
CCDC42Q96M95 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 OR4C2P-201ENST00000530855 1064 ntBASIC4.03□□□□□ -1.76
CCDC42Q96M95 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 OR8X1P-201ENST00000534542 869 ntBASIC4.03□□□□□ -1.76
CCDC42Q96M95 AL121766.1-201ENST00000547436 487 ntBASIC4.03□□□□□ -1.76
CCDC42Q96M95 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 Z82195.1-201ENST00000604558 398 ntBASIC4.03□□□□□ -1.76
CCDC42Q96M95 AL592436.1-201ENST00000605135 558 ntBASIC4.03□□□□□ -1.76
CCDC42Q96M95 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC42Q96M95 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CCDC42Q96M95 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CCDC42Q96M95 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC42Q96M95 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC42Q96M95 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC42Q96M95 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CCDC42Q96M95 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CCDC42Q96M95 AC073073.2-201ENST00000609827 2578 ntBASIC4.02□□□□□ -1.77
CCDC42Q96M95 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.02□□□□□ -1.77
CCDC42Q96M95 RNU6-283P-201ENST00000364788 107 ntBASIC4.02□□□□□ -1.77
CCDC42Q96M95 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC42Q96M95 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC42Q96M95 RNA5SP424-201ENST00000390988 115 ntBASIC4.02□□□□□ -1.77
CCDC42Q96M95 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC42Q96M95 ZNF602P-201ENST00000405929 924 ntBASIC4.02□□□□□ -1.77
CCDC42Q96M95 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC42Q96M95 RNU6-603P-201ENST00000411403 107 ntBASIC4.02□□□□□ -1.77
CCDC42Q96M95 AL356095.1-201ENST00000417217 199 ntBASIC4.02□□□□□ -1.77
CCDC42Q96M95 AC127526.1-201ENST00000417526 366 ntBASIC4.02□□□□□ -1.77
CCDC42Q96M95 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.02□□□□□ -1.77
CCDC42Q96M95 RPL18P10-201ENST00000425606 538 ntBASIC4.02□□□□□ -1.77
CCDC42Q96M95 NDUFB1P1-201ENST00000435191 180 ntBASIC4.02□□□□□ -1.77
CCDC42Q96M95 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms