Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL139022.2-201ENST00000606934 443 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AL359535.1-201ENST00000612100 1087 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AP005019.3-201ENST00000620418 560 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 AP001784.1-201ENST00000624107 428 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 FAM157B-203ENST00000639350 358 ntBASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM5Q96HC4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 RNU1-15P-201ENST00000353977 144 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AP002784.2-201ENST00000397300 549 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 ATP5F1P6-201ENST00000402768 767 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AL139095.3-201ENST00000419672 1203 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 RPL7AP25-201ENST00000423357 805 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 RPEP2-201ENST00000432149 701 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 FABP5P3-201ENST00000437960 408 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC073264.2-201ENST00000448886 166 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 ABCF2P2-201ENST00000450549 296 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC233982.1-201ENST00000451247 436 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC008280.2-201ENST00000455473 307 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC010469.1-201ENST00000463864 576 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC073522.1-201ENST00000483312 377 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC092902.1-201ENST00000486999 259 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC008885.2-201ENST00000509506 930 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AP003102.1-201ENST00000525638 661 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AP006289.1-201ENST00000538089 277 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC069240.1-201ENST00000548774 375 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC124068.1-201ENST00000563131 678 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 BNIP3P27-201ENST00000599991 412 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC020634.1-201ENST00000608701 549 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AL669942.2-201ENST00000620352 697 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC019278.1-201ENST00000623516 479 ntBASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PDLIM5Q96HC4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 AC067945.1-201ENST00000342609 618 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 RNU1-130P-201ENST00000363930 160 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 RPS3AP23-201ENST00000401762 784 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 AL590139.1-201ENST00000416267 400 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 RPS15AP40-201ENST00000419621 391 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 BRWD1P3-201ENST00000428816 390 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 AC004865.1-201ENST00000442276 1003 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 DNAJC19P8-201ENST00000452887 259 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 DHFRP3-201ENST00000455595 559 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 RPL35AP28-201ENST00000459730 331 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 AC126121.1-201ENST00000482313 553 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 IGLV3-26-201ENST00000520756 302 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 AL121834.1-201ENST00000572284 509 ntBASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.31□□□□□ -1.72
PDLIM5Q96HC4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms