Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL031667.3-201ENST00000620124 655 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 MTND4P34-201ENST00000572715 1371 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 CASC19-204ENST00000641001 2055 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 THAP12P4-201ENST00000528321 2266 ntBASIC4.74□□□□□ -1.65
CTHRC1Q96CG8 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC092079.1-201ENST00000558620 1985 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC092162.3-201ENST00000624511 1624 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 SNURFL-201ENST00000309296 343 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 RNU1-106P-201ENST00000384382 164 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 SNORA26.8-201ENST00000391306 124 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 MTCO3P41-201ENST00000414801 328 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 RPS26P40-201ENST00000435209 294 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 RPS29P9-201ENST00000440360 171 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 CYCSP24-201ENST00000445119 316 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AL354714.3-201ENST00000447284 493 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 NDUFA5P7-201ENST00000452914 242 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AL354710.1-201ENST00000453641 246 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC005912.1-201ENST00000495392 255 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC010424.1-201ENST00000506336 297 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 HSPE1P23-201ENST00000509838 286 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AL671862.1-201ENST00000515851 349 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 Y_RNA.695-201ENST00000516715 107 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC068714.1-201ENST00000559623 800 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC018552.1-201ENST00000562099 811 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 SULT1C2P2-201ENST00000562517 294 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC138915.2-201ENST00000569776 97 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC006116.3-201ENST00000592968 361 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC068790.6-201ENST00000602558 258 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC004987.4-201ENST00000603383 338 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC023813.4-201ENST00000607580 580 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 BX323046.1-201ENST00000610145 535 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 BX005214.3-202ENST00000619809 325 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AL392088.2-201ENST00000637607 285 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC114947.2-201ENST00000565748 2125 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC134882.1-201ENST00000603738 1676 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC093775.1-201ENST00000624154 1868 ntBASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.73□□□□□ -1.65
CTHRC1Q96CG8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms