Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SYNE1Q8NF91 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SYNE1Q8NF91 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
SYNE1Q8NF91 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SYNE1Q8NF91 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC1.19□□□□□ -2.22
SYNE1Q8NF91 OR6C71P-201ENST00000432580 913 ntBASIC1.19□□□□□ -2.22
SYNE1Q8NF91 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC1.19□□□□□ -2.22
SYNE1Q8NF91 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC1.19□□□□□ -2.22
SYNE1Q8NF91 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.19□□□□□ -2.22
SYNE1Q8NF91 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC1.19□□□□□ -2.22
SYNE1Q8NF91 SNX6P1-201ENST00000601728 1224 ntBASIC1.19□□□□□ -2.22
SYNE1Q8NF91 AC011816.2-201ENST00000607089 556 ntBASIC1.19□□□□□ -2.22
SYNE1Q8NF91 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.19□□□□□ -2.22
SYNE1Q8NF91 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 HMGB3P19-201ENST00000403971 560 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC115115.1-201ENST00000449927 248 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AGGF1P3-201ENST00000493675 1213 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 SRGNP1-201ENST00000603392 451 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 MIR7975-201ENST00000619350 68 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 JKAMPP1-201ENST00000413804 919 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 EIF1P3-201ENST00000423841 334 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 SEPT14P1-201ENST00000458703 648 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC006511.1-201ENST00000470614 315 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 SEPT7P8-201ENST00000413308 775 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RPS27AP17-201ENST00000463344 455 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RPS26P28-201ENST00000470806 348 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC020978.9-201ENST00000624380 1141 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 SNORD3H-201ENST00000384486 214 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC245052.5-201ENST00000416320 649 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC108032.1-201ENST00000416706 207 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 SETP6-201ENST00000479329 568 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC098799.1-201ENST00000504752 800 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC098799.3-201ENST00000506095 438 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC104619.4-201ENST00000510773 249 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC124312.6-202ENST00000623624 418 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 ST7-221ENST00000465133 2155 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 SNORD35B-201ENST00000363660 87 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RN7SKP247-201ENST00000411094 308 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 HSFY4P-201ENST00000415994 1181 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RPL7P2-201ENST00000427639 268 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 PDSS1P2-201ENST00000449397 678 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC118465.1-201ENST00000513820 1271 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RPL12P22-201ENST00000519073 490 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC068790.5-201ENST00000602741 355 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 MIR8069-1-201ENST00000616627 86 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 MIR8069-2-201ENST00000621412 86 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 DHX9P1-201ENST00000436565 3076 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RN7SKP156-201ENST00000410308 342 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RNA5SP146-201ENST00000410743 123 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 MAP1LC3BP1-201ENST00000417653 379 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RAD23BP3-201ENST00000454157 1152 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RPL37P3-201ENST00000456825 293 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 Y_RNA.638-201ENST00000459374 113 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms