Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 LPAL2-203ENST00000454031 2498 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC084782.1-201ENST00000564401 2465 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 RNU6-1013P-201ENST00000384180 107 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 RNU6-125P-201ENST00000384505 107 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC127526.1-201ENST00000417526 366 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AL807761.1-201ENST00000417622 171 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 PGBD4P6-201ENST00000421501 610 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC007559.1-201ENST00000428736 355 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 DNAJC19P8-201ENST00000452887 259 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 PPIAP27-201ENST00000453800 265 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 SETP20-201ENST00000457046 852 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 MEMO1P3-201ENST00000459811 302 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 RN7SL643P-201ENST00000471845 291 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC026254.2-201ENST00000475295 371 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 RPL7P51-201ENST00000490532 749 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC069061.3-201ENST00000582254 823 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AL133338.2-201ENST00000604292 736 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 FAM27E2-201ENST00000619668 403 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC107980.1-201ENST00000558671 3355 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 CUL4AP1-201ENST00000514750 1863 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AC005592.1-201ENST00000566527 1640 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 SAGE3P-201ENST00000619800 1635 ntBASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS3Q8IXF0 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 Y_RNA.80-201ENST00000362996 102 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 RNU6-713P-201ENST00000384761 107 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 MRPL42P2-201ENST00000403169 426 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 RNU6-77P-201ENST00000410554 91 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 Y_RNA.646-201ENST00000410980 101 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 RPS3P2-201ENST00000421346 701 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 RPL23AP30-201ENST00000432419 501 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 RPS6P12-201ENST00000432491 726 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC003989.1-201ENST00000434569 565 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 MGAT2P1-201ENST00000449718 797 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 RN7SL369P-201ENST00000477138 299 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 RPL32P9-201ENST00000487963 407 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC090638.1-201ENST00000498296 909 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC025458.1-201ENST00000506046 166 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 RNU6-864P-201ENST00000516256 108 ntBASIC6.67□□□□□ -1.34
NPAS3Q8IXF0 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms