Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL359837.1-201ENST00000381357 287 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 RPL7AP25-201ENST00000423357 805 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 NANOGP5-201ENST00000424456 877 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AL009174.1-201ENST00000426577 416 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 RPS26P40-201ENST00000435209 294 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 RPL7AP61-201ENST00000443410 636 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AL591623.2-201ENST00000449978 222 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC079168.2-201ENST00000453977 416 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC093166.2-201ENST00000455969 1017 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 NAP1L1P3-201ENST00000462291 880 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC091167.1-201ENST00000492017 396 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 SNORA31.9-201ENST00000516429 84 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 IGLVIV-65-201ENST00000517313 360 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 MTCO3P15-201ENST00000526563 574 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 OR8K4P-201ENST00000534608 872 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 SETP1-201ENST00000556014 845 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC018552.3-201ENST00000567416 561 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC034105.4-201ENST00000568304 277 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 NF1P5-201ENST00000588287 448 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AL160237.3-201ENST00000604114 1013 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AL365400.2-201ENST00000605604 902 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AC099676.1-201ENST00000608886 657 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 AL445567.2-201ENST00000618935 498 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 VN1R7P-201ENST00000619242 903 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 ZNF663P-202ENST00000641770 1131 ntBASIC5.09□□□□□ -1.59
HERC6Q8IVU3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.09□□□□□ -1.59
HERC6Q8IVU3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
HERC6Q8IVU3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.09□□□□□ -1.6
HERC6Q8IVU3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HERC6Q8IVU3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 SGO1P1-201ENST00000603525 1447 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AL450326.2-201ENST00000421913 1962 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AL121657.1-201ENST00000327215 531 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 RPL32P23-201ENST00000397237 405 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 QRSL1P2-201ENST00000418582 964 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AC013429.2-201ENST00000418798 781 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 RPS12P10-201ENST00000427031 377 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 RPL12P46-201ENST00000436610 195 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 EEF1A1P1-201ENST00000447052 739 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 RPL7P19-201ENST00000469948 618 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 RPL21P126-201ENST00000470049 478 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 RPL36AP41-201ENST00000493820 306 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 MRPL49P2-201ENST00000521066 465 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 OR8G5-201ENST00000524943 1041 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 CYCSP29-201ENST00000533731 318 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AL390334.1-201ENST00000556395 450 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AC116553.2-201ENST00000564203 463 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AC110743.1-201ENST00000584870 478 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 AL583856.2-201ENST00000606298 543 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 U3.53-201ENST00000628922 216 ntBASIC5.08□□□□□ -1.6
HERC6Q8IVU3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.08□□□□□ -1.6
HERC6Q8IVU3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms