Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 DHX40P1-201ENST00000588725 1412 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 RNU6-666P-201ENST00000363499 107 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 RNU6-729P-201ENST00000384399 107 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 RNU6-549P-201ENST00000384433 107 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AL590762.2-201ENST00000395798 571 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AL079342.2-201ENST00000403367 482 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AL049697.2-201ENST00000403708 294 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 HNRNPDP2-201ENST00000406475 478 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 U3.35-201ENST00000408405 208 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 RN7SKP106-201ENST00000410832 272 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 TCEA1P4-201ENST00000415066 844 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC140479.3-201ENST00000418944 1126 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 MFSD13B-201ENST00000420133 1290 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 RPL21P43-201ENST00000425440 472 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC005345.1-201ENST00000431868 217 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 FTH1P16-201ENST00000435241 552 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC234064.1-201ENST00000436312 247 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 CACYBPP1-201ENST00000438592 684 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 CDY12P-201ENST00000440679 1015 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 CDY13P-201ENST00000445813 1015 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC079168.2-201ENST00000453977 416 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AL445669.2-201ENST00000454425 421 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC025164.1-201ENST00000496249 478 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 SETP1-201ENST00000556014 845 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC090888.1-201ENST00000561335 1141 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AL451086.1-201ENST00000605596 223 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC080013.3-201ENST00000606839 578 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 AC105227.2-201ENST00000615075 605 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 OR8B1P-202ENST00000641132 1178 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 SOCS5P3-201ENST00000425115 1576 ntBASIC4.99□□□□□ -1.61
VSTM1Q6UX27 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VSTM1Q6UX27 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 AC138393.1-206ENST00000540997 1886 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 GTF2H2B-203ENST00000508065 1432 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 SEC63P2-201ENST00000503863 1939 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 snoZ40.1-201ENST00000364540 72 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 RNA5SP397-201ENST00000391323 118 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 RSL24D1P4-201ENST00000400938 484 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 Y_RNA.625-201ENST00000411256 107 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 AC105402.1-201ENST00000413336 545 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 NPM1P33-201ENST00000438918 872 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 NDUFA12P1-201ENST00000455914 406 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.98□□□□□ -1.61
VSTM1Q6UX27 RNU7-125P-201ENST00000458760 62 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 AC021205.1-201ENST00000468797 348 ntBASIC4.98□□□□□ -1.61
VSTM1Q6UX27 AC091959.2-201ENST00000477363 321 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms