Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 RNU1-132P-201ENST00000364300 164 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AL583835.1-201ENST00000399570 407 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AL603766.1-201ENST00000407763 664 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 RNU2-65P-201ENST00000410162 185 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 RNA5SP36-201ENST00000410197 133 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 RN7SKP235-201ENST00000410662 305 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 RPL23AP26-201ENST00000412728 464 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 NRBF2P2-201ENST00000413087 861 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 MTND2P15-201ENST00000418575 892 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 CHIAP3-201ENST00000423668 1133 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AC109327.1-201ENST00000471666 403 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 RN7SL691P-201ENST00000494487 301 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 HMGB1P21-201ENST00000502313 581 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 HPRT1P1-201ENST00000509498 657 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 KCTD9P2-201ENST00000512203 1013 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AC008562.1-201ENST00000521763 330 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AP003117.1-201ENST00000602771 554 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AL450270.1-201ENST00000606160 391 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AC245389.2-201ENST00000616023 576 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AC243756.2-201ENST00000618406 463 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AC242843.1-201ENST00000618702 573 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AL356121.2-201ENST00000624715 780 ntBASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.23□□□□□ -1.73
LDLRAP1Q5SW96 NOL8P1-201ENST00000508336 3529 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 GCNT6-201ENST00000379591 934 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 OR6C69P-201ENST00000394268 893 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 MIR1179-201ENST00000408703 91 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AC004022.2-201ENST00000413824 193 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 RPS23P10-201ENST00000416185 486 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 NANOGP6-201ENST00000429190 847 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AC023347.2-201ENST00000433994 462 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 HLA-N-201ENST00000437516 135 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 ARL5AP2-201ENST00000444698 533 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AL451050.1-201ENST00000450126 415 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AL353718.1-201ENST00000451028 517 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 RPL23AP71-201ENST00000470966 469 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 UQCRHP4-201ENST00000471686 272 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AC011037.1-201ENST00000483964 558 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AC091167.1-201ENST00000492017 396 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AC104164.2-201ENST00000496953 495 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AC083829.1-201ENST00000503756 657 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 RN7SKP82-201ENST00000516786 223 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 SNORA76.2-201ENST00000517095 137 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 OR5AK3P-201ENST00000527486 1297 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 TVP23BP1-201ENST00000557500 617 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AL445423.1-201ENST00000609941 536 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AL445363.3-201ENST00000623080 671 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 AC016717.3-201ENST00000624730 554 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 MIR3653-201ENST00000625572 110 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 HPVC1-201ENST00000629899 1198 ntBASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDLRAP1Q5SW96 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
LDLRAP1Q5SW96 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.73
LDLRAP1Q5SW96 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LDLRAP1Q5SW96 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LDLRAP1Q5SW96 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LDLRAP1Q5SW96 RNA5SP513-201ENST00000364648 118 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms