Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 HIGD1AP4-201ENST00000430194 280 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 COX6B1P7-201ENST00000430845 235 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 BTF3P10-201ENST00000433415 495 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 SKP1P1-201ENST00000438081 489 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 RPS20P32-201ENST00000456044 356 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 HMGB3P30-201ENST00000457863 606 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 RPL23AP24-201ENST00000458203 385 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 AK3P4-201ENST00000504283 583 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 RN7SKP92-201ENST00000517266 244 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 UBE2NP1-201ENST00000545592 458 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 MIR4436B2-201ENST00000581415 91 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 MIR4436B1-201ENST00000583272 91 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 AL390816.3-201ENST00000604527 1066 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 ATE1-AS1-202ENST00000636460 506 ntBASIC3.5□□□□□ -1.85
CCDC58Q4VC31 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC58Q4VC31 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AL132640.2-201ENST00000559968 1698 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AL137100.1-201ENST00000556703 1620 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 RNU1-132P-201ENST00000364300 164 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 MIR550A3-201ENST00000390735 95 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 RPS16P5-201ENST00000406501 404 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 RPS29P31-201ENST00000446147 164 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 FCF1P7-201ENST00000451185 558 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 snoU13.1-201ENST00000459157 104 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 RN7SL177P-201ENST00000476596 299 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 RNU6-347P-201ENST00000516658 105 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AC008011.1-201ENST00000545989 227 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 MIR4480-201ENST00000582492 71 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AC020915.5-201ENST00000596836 964 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AC018816.2-201ENST00000621460 353 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 MIR4278-201ENST00000636094 69 ntBASIC3.49□□□□□ -1.85
CCDC58Q4VC31 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC58Q4VC31 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 RPL37P18-201ENST00000411602 243 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 FAR2P4-202ENST00000425399 584 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 RPS3AP54-201ENST00000435535 734 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 RPS4XP4-201ENST00000443195 763 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 TXNP2-201ENST00000443918 295 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC010683.1-201ENST00000473673 378 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 RN7SL604P-201ENST00000492589 296 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 RPS4XP14-201ENST00000493072 781 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 RN7SKP209-201ENST00000516888 304 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 SUMO2P20-201ENST00000520803 283 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC091516.1-201ENST00000549191 703 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC090877.1-201ENST00000561418 344 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC037471.2-201ENST00000564941 598 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 MIR4425-201ENST00000580572 84 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms