Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 OR5M2P-201ENST00000529003 936 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 OR6C73P-201ENST00000546432 358 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AC008638.3-201ENST00000603341 463 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AC011453.2-201ENST00000603737 729 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AP002360.3-201ENST00000607673 710 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AC093799.2-201ENST00000610062 578 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AC007497.1-201ENST00000610421 561 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AC121761.2-201ENST00000617300 689 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AC022306.3-201ENST00000619930 550 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AC007275.1-201ENST00000621243 671 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 AC009269.6-201ENST00000621778 588 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ANKRD55Q3KP44 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC105074.1-201ENST00000623380 3095 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 MTND5P3-201ENST00000438536 1800 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 ZNF849P-201ENST00000594711 1566 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC109780.1-201ENST00000451768 1344 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC016716.1-201ENST00000265882 708 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 RNU4-4P-201ENST00000364588 130 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 RNU1-44P-201ENST00000384453 163 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 RNU6-1257P-201ENST00000384625 110 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 MIR93-201ENST00000385024 80 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 MIR513A2-201ENST00000385249 127 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 SNORD65C-201ENST00000390962 71 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AP002530.1-201ENST00000405705 684 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 RPL23AP48-201ENST00000406913 488 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 OR4F13P-201ENST00000428478 931 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 UBE2V1P1-201ENST00000430836 445 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 VN1R54P-201ENST00000435210 1049 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 USP9YP7-201ENST00000436723 430 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AL772161.1-201ENST00000439130 476 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 USP9YP32-201ENST00000452432 430 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 RPS4XP6-201ENST00000477670 797 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC025164.1-201ENST00000496249 478 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC093801.2-201ENST00000503966 1050 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 VWA8P1-201ENST00000510889 176 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC010374.2-201ENST00000512933 535 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC015795.1-201ENST00000513669 327 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 CYB5AP5-201ENST00000549779 389 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC122134.1-202ENST00000569111 1201 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 VN1R88P-201ENST00000596787 292 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 BNIP3P39-201ENST00000601077 554 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 MEMO1P5-201ENST00000604810 406 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AF129408.1-201ENST00000608767 431 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC124016.2-201ENST00000610058 665 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC004825.2-201ENST00000616634 455 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AL138721.1-201ENST00000616756 179 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 MIR6730-201ENST00000622213 67 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC091905.2-201ENST00000623143 306 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC006927.2-201ENST00000639256 389 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC099654.2-201ENST00000433031 1980 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AC012020.1-201ENST00000624541 1728 ntBASIC3.81□□□□□ -1.8
ANKRD55Q3KP44 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.8□□□□□ -1.8
ANKRD55Q3KP44 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms