Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 RPL12P50-201ENST00000603116 116 ntBASIC4.92□□□□□ -1.62
COL16A1Q07092 AC104763.2-201ENST00000604179 382 ntBASIC4.92□□□□□ -1.62
COL16A1Q07092 AC097505.1-201ENST00000610199 565 ntBASIC4.92□□□□□ -1.62
COL16A1Q07092 AC069209.1-201ENST00000619282 651 ntBASIC4.92□□□□□ -1.62
COL16A1Q07092 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL16A1Q07092 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL16A1Q07092 AC024341.1-201ENST00000526444 1552 ntBASIC4.92□□□□□ -1.62
COL16A1Q07092 MAPK10-303ENST00000641324 3959 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.91□□□□□ -1.62
COL16A1Q07092 FTLP6-201ENST00000355274 422 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 RNU6-673P-201ENST00000365084 104 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 AL358178.1-201ENST00000407698 397 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 RNA5SP306-201ENST00000411087 107 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.91□□□□□ -1.62
COL16A1Q07092 AL158071.1-201ENST00000430315 461 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.91□□□□□ -1.62
COL16A1Q07092 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.91□□□□□ -1.62
COL16A1Q07092 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.91□□□□□ -1.62
COL16A1Q07092 AC004924.1-201ENST00000480160 781 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 FTH1P24-201ENST00000503502 462 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 AC138409.2-202ENST00000507274 458 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 AC008694.2-201ENST00000517591 306 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 AC113192.3-201ENST00000529152 742 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL16A1Q07092 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL16A1Q07092 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL16A1Q07092 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL16A1Q07092 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL16A1Q07092 FAM35BP-202ENST00000497389 3337 ntBASIC4.91□□□□□ -1.62
COL16A1Q07092 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
COL16A1Q07092 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.91□□□□□ -1.62
COL16A1Q07092 RNU1-140P-201ENST00000365040 165 ntBASIC4.9□□□□□ -1.62
COL16A1Q07092 OR1AA1P-201ENST00000419597 916 ntBASIC4.9□□□□□ -1.62
COL16A1Q07092 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.9□□□□□ -1.62
COL16A1Q07092 AL645931.1-201ENST00000439737 410 ntBASIC4.9□□□□□ -1.62
COL16A1Q07092 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.9□□□□□ -1.62
COL16A1Q07092 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
COL16A1Q07092 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.9□□□□□ -1.62
COL16A1Q07092 MIR7851-201ENST00000610611 160 ntBASIC4.9□□□□□ -1.62
COL16A1Q07092 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.9□□□□□ -1.62
COL16A1Q07092 THAP12P5-201ENST00000405864 2275 ntBASIC4.9□□□□□ -1.62
COL16A1Q07092 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL16A1Q07092 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
COL16A1Q07092 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL16A1Q07092 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
COL16A1Q07092 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.9□□□□□ -1.63
COL16A1Q07092 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL16A1Q07092 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.9□□□□□ -1.63
COL16A1Q07092 RNU1-15P-201ENST00000353977 144 ntBASIC4.9□□□□□ -1.63
COL16A1Q07092 RNA5SP424-201ENST00000390988 115 ntBASIC4.9□□□□□ -1.63
COL16A1Q07092 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL16A1Q07092 AL355994.1-201ENST00000424379 260 ntBASIC4.9□□□□□ -1.63
COL16A1Q07092 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.9□□□□□ -1.63
COL16A1Q07092 AC087276.1-201ENST00000529659 480 ntBASIC4.9□□□□□ -1.63
COL16A1Q07092 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.9□□□□□ -1.63
COL16A1Q07092 AC006539.2-201ENST00000601729 572 ntBASIC4.9□□□□□ -1.63
COL16A1Q07092 MIR7106-201ENST00000612419 65 ntBASIC4.9□□□□□ -1.63
COL16A1Q07092 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL16A1Q07092 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL16A1Q07092 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.89□□□□□ -1.63
COL16A1Q07092 AC005183.1-201ENST00000603687 1979 ntBASIC4.89□□□□□ -1.63
COL16A1Q07092 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL16A1Q07092 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.89□□□□□ -1.63
COL16A1Q07092 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COL16A1Q07092 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL16A1Q07092 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL16A1Q07092 MIR449A-201ENST00000362113 91 ntBASIC4.89□□□□□ -1.63
COL16A1Q07092 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
COL16A1Q07092 BX842559.1-201ENST00000419615 532 ntBASIC4.89□□□□□ -1.63
COL16A1Q07092 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.89□□□□□ -1.63
COL16A1Q07092 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.89□□□□□ -1.63
COL16A1Q07092 RPL31P61-201ENST00000496160 376 ntBASIC4.89□□□□□ -1.63
COL16A1Q07092 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.89□□□□□ -1.63
COL16A1Q07092 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.89□□□□□ -1.63
COL16A1Q07092 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.89□□□□□ -1.63
COL16A1Q07092 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.89□□□□□ -1.63
COL16A1Q07092 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.89□□□□□ -1.63
COL16A1Q07092 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.89□□□□□ -1.63
COL16A1Q07092 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.89□□□□□ -1.63
COL16A1Q07092 AC136601.2-201ENST00000604356 474 ntBASIC4.89□□□□□ -1.63
COL16A1Q07092 AC093732.2-201ENST00000607950 274 ntBASIC4.89□□□□□ -1.63
COL16A1Q07092 AL591424.2-201ENST00000617023 128 ntBASIC4.89□□□□□ -1.63
COL16A1Q07092 AC138932.5-201ENST00000617759 563 ntBASIC4.89□□□□□ -1.63
COL16A1Q07092 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.89□□□□□ -1.63
COL16A1Q07092 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.89□□□□□ -1.63
COL16A1Q07092 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
COL16A1Q07092 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL16A1Q07092 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL16A1Q07092 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
COL16A1Q07092 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL16A1Q07092 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL16A1Q07092 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL16A1Q07092 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
COL16A1Q07092 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.88□□□□□ -1.63
COL16A1Q07092 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL16A1Q07092 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL16A1Q07092 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COL16A1Q07092 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL16A1Q07092 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.88□□□□□ -1.63
COL16A1Q07092 RPL7P48-201ENST00000461513 746 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms