Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
HSPG2P98160 AC097504.1-201ENST00000515103 2415 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 AC067945.1-201ENST00000342609 618 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 MTHFD2P2-201ENST00000407725 247 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 OR6K4P-201ENST00000423179 955 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 HIGD1AP4-201ENST00000430194 280 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AC000041.1-201ENST00000439655 175 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.24□□□□□ -2.05
HSPG2P98160 AC026784.1-201ENST00000507986 352 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AC100770.1-201ENST00000532310 322 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AC092868.3-201ENST00000560515 784 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.24□□□□□ -2.05
HSPG2P98160 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.24□□□□□ -2.05
HSPG2P98160 AC097505.1-201ENST00000610199 565 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.23□□□□□ -2.05
HSPG2P98160 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
HSPG2P98160 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC2.23□□□□□ -2.05
HSPG2P98160 OR2AH1P-201ENST00000425717 928 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 RN7SL432P-201ENST00000484057 298 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.23□□□□□ -2.05
HSPG2P98160 CYCSP28-201ENST00000534284 321 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.23□□□□□ -2.05
HSPG2P98160 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC2.23□□□□□ -2.05
HSPG2P98160 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.23□□□□□ -2.05
HSPG2P98160 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.23□□□□□ -2.05
HSPG2P98160 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
HSPG2P98160 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC2.23□□□□□ -2.05
HSPG2P98160 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.23□□□□□ -2.05
HSPG2P98160 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.23□□□□□ -2.05
HSPG2P98160 RPS23P10-201ENST00000416185 486 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 AC005002.1-201ENST00000447458 540 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.23□□□□□ -2.05
HSPG2P98160 RPL21P11-201ENST00000461458 483 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 AC006517.1-201ENST00000480485 328 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.23□□□□□ -2.05
HSPG2P98160 RPL21P7-201ENST00000557463 483 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 AC010503.3-201ENST00000594355 540 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.23□□□□□ -2.05
HSPG2P98160 PHACTR2P1-201ENST00000605639 1414 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 EEF1A1P42-201ENST00000613436 1331 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.23□□□□□ -2.05
HSPG2P98160 AC093535.2-201ENST00000624769 2326 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC2.23□□□□□ -2.05
HSPG2P98160 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 RNU6-304P-201ENST00000364855 107 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC2.23□□□□□ -2.05
HSPG2P98160 REREP1Y-201ENST00000422655 198 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 REREP2Y-201ENST00000439103 200 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 HMGB1P5-202ENST00000451497 985 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 TPT1P1-201ENST00000458495 518 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 AL591473.1-201ENST00000464297 313 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC2.23□□□□□ -2.05
HSPG2P98160 snoU109.6-201ENST00000516831 118 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 MIR4319-201ENST00000577285 85 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 SNORA62.6-201ENST00000606322 83 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 AC068254.2-201ENST00000623938 3577 ntBASIC2.23□□□□□ -2.05
HSPG2P98160 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
HSPG2P98160 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HSPG2P98160 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HSPG2P98160 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HSPG2P98160 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
HSPG2P98160 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HSPG2P98160 OR5H2-201ENST00000355273 945 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HSPG2P98160 MIR1271-201ENST00000408537 86 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 RPL36AP10-201ENST00000421785 322 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 AL139281.1-201ENST00000422120 335 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 RPL23AP25-201ENST00000430973 463 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.22□□□□□ -2.05
HSPG2P98160 AC103783.1-201ENST00000520506 373 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 AP000916.1-201ENST00000533869 835 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC2.22□□□□□ -2.05
HSPG2P98160 AL022322.2-201ENST00000624072 20397 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.22□□□□□ -2.05
HSPG2P98160 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
HSPG2P98160 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
HSPG2P98160 ZNF826P-207ENST00000622273 1910 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 RPS4XP8-201ENST00000402039 771 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 RPL21P112-201ENST00000434403 463 ntBASIC2.22□□□□□ -2.05
HSPG2P98160 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.22□□□□□ -2.05
HSPG2P98160 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.22□□□□□ -2.05
HSPG2P98160 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC2.22□□□□□ -2.05
HSPG2P98160 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
HSPG2P98160 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms