Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RPL23AP27-201ENST00000415161 451 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX6-1P78426 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX6-1P78426 COX6CP15-201ENST00000426313 211 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 ZYG11AP1-201ENST00000430329 837 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 USP24P1-201ENST00000433802 779 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 AL353706.1-201ENST00000436728 494 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 AL512286.1-201ENST00000439244 400 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 RPL12P3-201ENST00000440080 396 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 RPL5P25-201ENST00000441148 775 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX6-1P78426 AP000936.2-201ENST00000447151 681 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX6-1P78426 TRBV26-201ENST00000456572 344 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 AC005532.2-201ENST00000467154 373 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 RPL15P21-201ENST00000495592 567 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX6-1P78426 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX6-1P78426 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.93□□□□□ -1.62
NKX6-1P78426 MTND5P4-201ENST00000514978 288 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX6-1P78426 SMG1P6-201ENST00000532337 2930 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.93□□□□□ -1.62
NKX6-1P78426 HMGN2P6-201ENST00000551091 273 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 PSMB7P1-201ENST00000556349 514 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX6-1P78426 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 AC012213.3-201ENST00000577199 777 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX6-1P78426 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX6-1P78426 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX6-1P78426 NANOGP3-201ENST00000605855 286 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX6-1P78426 AC078899.5-201ENST00000612475 178 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 AC009878.1-201ENST00000621819 340 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 AC092656.1-203ENST00000624134 423 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 OR4G11P-202ENST00000642116 1414 ntBASIC4.93□□□□□ -1.62
NKX6-1P78426 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NKX6-1P78426 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
NKX6-1P78426 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX6-1P78426 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.93□□□□□ -1.62
NKX6-1P78426 AC006210.2-201ENST00000367074 1545 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 MTCO1P23-201ENST00000415223 1526 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX6-1P78426 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX6-1P78426 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX6-1P78426 RNU5F-7P-201ENST00000363696 115 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 RNA5SP30-201ENST00000365552 115 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX6-1P78426 MIR130A-201ENST00000385274 89 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX6-1P78426 RN7SKP125-201ENST00000410481 302 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 RN7SKP142-201ENST00000411236 328 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 RPL35AP24-201ENST00000413846 330 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AL121878.1-201ENST00000418638 859 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AC092647.1-201ENST00000420654 287 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AL049610.1-201ENST00000423374 372 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX6-1P78426 VN1R21P-201ENST00000426703 765 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AL158073.1-201ENST00000426848 1104 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 CRIP1P1-201ENST00000427567 185 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NKX6-1P78426 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX6-1P78426 CEACAMP1-201ENST00000434624 1035 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 CYCSP12-201ENST00000437729 300 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX6-1P78426 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.92□□□□□ -1.62
NKX6-1P78426 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX6-1P78426 RN7SL583P-201ENST00000475692 287 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX6-1P78426 AC008953.1-201ENST00000497334 318 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AC024558.1-201ENST00000505008 528 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AC006499.2-201ENST00000513470 337 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 RNU6-150P-201ENST00000516237 95 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 NRBF2P4-201ENST00000520874 850 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX6-1P78426 HIGD1AP5-201ENST00000529959 259 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX6-1P78426 AL359219.2-201ENST00000555184 348 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX6-1P78426 AC006362.1-201ENST00000567392 174 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AC136618.2-201ENST00000575091 400 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX6-1P78426 MIR4716-201ENST00000579628 84 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AP001004.1-201ENST00000582468 324 ntBASIC4.92□□□□□ -1.62
NKX6-1P78426 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX6-1P78426 AC008759.1-201ENST00000589783 983 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms