Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UBA52P62987 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.43□□□□□ -1.86
UBA52P62987 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.43□□□□□ -1.86
UBA52P62987 AC106871.1-201ENST00000568324 3102 ntBASIC3.43□□□□□ -1.86
UBA52P62987 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UBA52P62987 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UBA52P62987 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UBA52P62987 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
UBA52P62987 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBA52P62987 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
UBA52P62987 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.42□□□□□ -1.86
UBA52P62987 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.42□□□□□ -1.86
UBA52P62987 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.42□□□□□ -1.86
UBA52P62987 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
UBA52P62987 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
UBA52P62987 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
UBA52P62987 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.42□□□□□ -1.86
UBA52P62987 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBA52P62987 PTMAP2-201ENST00000397627 327 ntBASIC3.42□□□□□ -1.86
UBA52P62987 AC097374.1-203ENST00000400783 485 ntBASIC3.42□□□□□ -1.86
UBA52P62987 RNU6ATAC-201ENST00000408749 126 ntBASIC3.42□□□□□ -1.86
UBA52P62987 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.42□□□□□ -1.86
UBA52P62987 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.42□□□□□ -1.86
UBA52P62987 RANP7-201ENST00000418085 644 ntBASIC3.42□□□□□ -1.86
UBA52P62987 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UBA52P62987 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.42□□□□□ -1.86
UBA52P62987 RPS29P7-201ENST00000439662 171 ntBASIC3.42□□□□□ -1.86
UBA52P62987 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.42□□□□□ -1.86
UBA52P62987 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.42□□□□□ -1.86
UBA52P62987 AL358232.1-201ENST00000448030 501 ntBASIC3.42□□□□□ -1.86
UBA52P62987 DNAJC19P1-201ENST00000455312 319 ntBASIC3.42□□□□□ -1.86
UBA52P62987 snoU13.22-201ENST00000459428 104 ntBASIC3.42□□□□□ -1.86
UBA52P62987 AC004801.2-202ENST00000463559 283 ntBASIC3.42□□□□□ -1.86
UBA52P62987 RPL7P22-201ENST00000466005 733 ntBASIC3.42□□□□□ -1.86
UBA52P62987 RPL35AP15-201ENST00000468042 339 ntBASIC3.42□□□□□ -1.86
UBA52P62987 RPL7L1P8-201ENST00000469911 741 ntBASIC3.42□□□□□ -1.86
UBA52P62987 AL133372.1-201ENST00000493565 745 ntBASIC3.42□□□□□ -1.86
UBA52P62987 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.42□□□□□ -1.86
UBA52P62987 AC010460.1-201ENST00000507087 466 ntBASIC3.42□□□□□ -1.86
UBA52P62987 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
UBA52P62987 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.42□□□□□ -1.86
UBA52P62987 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UBA52P62987 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.42□□□□□ -1.86
UBA52P62987 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.42□□□□□ -1.86
UBA52P62987 MIR4444-1-201ENST00000581696 74 ntBASIC3.42□□□□□ -1.86
UBA52P62987 MIR4444-2-201ENST00000584390 74 ntBASIC3.42□□□□□ -1.86
UBA52P62987 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.42□□□□□ -1.86
UBA52P62987 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.42□□□□□ -1.86
UBA52P62987 AL592295.2-201ENST00000612578 206 ntBASIC3.42□□□□□ -1.86
UBA52P62987 MIR6075-201ENST00000620782 95 ntBASIC3.42□□□□□ -1.86
UBA52P62987 AC112200.1-201ENST00000625015 234 ntBASIC3.42□□□□□ -1.86
UBA52P62987 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBA52P62987 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
UBA52P62987 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBA52P62987 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.42□□□□□ -1.86
UBA52P62987 RLIMP1-201ENST00000339626 1680 ntBASIC3.42□□□□□ -1.86
UBA52P62987 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBA52P62987 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
UBA52P62987 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBA52P62987 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UBA52P62987 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBA52P62987 HSPA8P17-201ENST00000427029 1382 ntBASIC3.41□□□□□ -1.86
UBA52P62987 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
UBA52P62987 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBA52P62987 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.41□□□□□ -1.86
UBA52P62987 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBA52P62987 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBA52P62987 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
UBA52P62987 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.41□□□□□ -1.86
UBA52P62987 PGBD4P8-201ENST00000412993 562 ntBASIC3.41□□□□□ -1.86
UBA52P62987 OR8F1P-201ENST00000425243 930 ntBASIC3.41□□□□□ -1.86
UBA52P62987 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.41□□□□□ -1.86
UBA52P62987 NPM1P34-201ENST00000428821 893 ntBASIC3.41□□□□□ -1.86
UBA52P62987 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.41□□□□□ -1.86
UBA52P62987 CEACAMP1-201ENST00000434624 1035 ntBASIC3.41□□□□□ -1.86
UBA52P62987 AC007389.2-201ENST00000434630 306 ntBASIC3.41□□□□□ -1.86
UBA52P62987 SNRPFP2-201ENST00000440710 251 ntBASIC3.41□□□□□ -1.86
UBA52P62987 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.41□□□□□ -1.86
UBA52P62987 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.41□□□□□ -1.86
UBA52P62987 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.41□□□□□ -1.86
UBA52P62987 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.41□□□□□ -1.86
UBA52P62987 AC026726.1-201ENST00000512859 601 ntBASIC3.41□□□□□ -1.86
UBA52P62987 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.41□□□□□ -1.86
UBA52P62987 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
UBA52P62987 AC092747.2-201ENST00000545069 983 ntBASIC3.41□□□□□ -1.86
UBA52P62987 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.41□□□□□ -1.86
UBA52P62987 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.41□□□□□ -1.86
UBA52P62987 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.41□□□□□ -1.86
UBA52P62987 RN7SL703P-201ENST00000578485 302 ntBASIC3.41□□□□□ -1.86
UBA52P62987 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.41□□□□□ -1.86
UBA52P62987 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.41□□□□□ -1.86
UBA52P62987 AL451086.1-201ENST00000605596 223 ntBASIC3.41□□□□□ -1.86
UBA52P62987 AC008121.2-201ENST00000614647 523 ntBASIC3.41□□□□□ -1.86
UBA52P62987 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.41□□□□□ -1.86
UBA52P62987 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
UBA52P62987 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UBA52P62987 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.41□□□□□ -1.86
UBA52P62987 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
UBA52P62987 UBE3AP2-201ENST00000429033 2259 ntBASIC3.41□□□□□ -1.86
UBA52P62987 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms