Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RNU11-4P-201ENST00000391149 133 ntBASIC3.53□□□□□ -1.84
LSM6P62312 RPS27AP11-201ENST00000402798 447 ntBASIC3.53□□□□□ -1.84
LSM6P62312 RN7SKP56-201ENST00000410513 331 ntBASIC3.53□□□□□ -1.84
LSM6P62312 RHEBP3-201ENST00000411920 351 ntBASIC3.53□□□□□ -1.84
LSM6P62312 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM6P62312 KCTD9P3-201ENST00000434597 1169 ntBASIC3.53□□□□□ -1.84
LSM6P62312 AF228730.2-201ENST00000438784 848 ntBASIC3.53□□□□□ -1.84
LSM6P62312 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM6P62312 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM6P62312 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM6P62312 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM6P62312 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM6P62312 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM6P62312 TVP23BP2-201ENST00000455082 615 ntBASIC3.53□□□□□ -1.84
LSM6P62312 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM6P62312 RN7SL860P-201ENST00000473738 223 ntBASIC3.53□□□□□ -1.84
LSM6P62312 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM6P62312 Vault.1-201ENST00000516474 102 ntBASIC3.53□□□□□ -1.84
LSM6P62312 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM6P62312 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM6P62312 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LSM6P62312 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.53□□□□□ -1.84
LSM6P62312 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM6P62312 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.53□□□□□ -1.84
LSM6P62312 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM6P62312 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LSM6P62312 RN7SL600P-201ENST00000581811 299 ntBASIC3.53□□□□□ -1.84
LSM6P62312 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.53□□□□□ -1.84
LSM6P62312 AP001180.3-201ENST00000582221 145 ntBASIC3.53□□□□□ -1.84
LSM6P62312 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM6P62312 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM6P62312 AC067852.4-201ENST00000590314 478 ntBASIC3.53□□□□□ -1.84
LSM6P62312 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.53□□□□□ -1.84
LSM6P62312 AC012531.5-201ENST00000611375 151 ntBASIC3.53□□□□□ -1.84
LSM6P62312 AL589935.2-201ENST00000616471 1231 ntBASIC3.53□□□□□ -1.84
LSM6P62312 AL139089.1-201ENST00000620372 975 ntBASIC3.53□□□□□ -1.84
LSM6P62312 AC092159.4-201ENST00000624944 550 ntBASIC3.53□□□□□ -1.84
LSM6P62312 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM6P62312 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM6P62312 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
LSM6P62312 TNPO1P3-201ENST00000436471 2662 ntBASIC3.53□□□□□ -1.84
LSM6P62312 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.53□□□□□ -1.84
LSM6P62312 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
LSM6P62312 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
LSM6P62312 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
LSM6P62312 BDP1P-201ENST00000582658 1990 ntBASIC3.52□□□□□ -1.85
LSM6P62312 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LSM6P62312 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM6P62312 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
LSM6P62312 AC233968.1-201ENST00000611212 1300 ntBASIC3.52□□□□□ -1.85
LSM6P62312 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM6P62312 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LSM6P62312 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM6P62312 RNA5SP167-201ENST00000365461 116 ntBASIC3.52□□□□□ -1.85
LSM6P62312 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.52□□□□□ -1.85
LSM6P62312 RPL7AP73-201ENST00000413490 353 ntBASIC3.52□□□□□ -1.85
LSM6P62312 AC016769.2-201ENST00000414815 475 ntBASIC3.52□□□□□ -1.85
LSM6P62312 OR5BE1P-201ENST00000425977 939 ntBASIC3.52□□□□□ -1.85
LSM6P62312 AC017083.1-201ENST00000428093 483 ntBASIC3.52□□□□□ -1.85
LSM6P62312 HIGD1AP4-201ENST00000430194 280 ntBASIC3.52□□□□□ -1.85
LSM6P62312 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM6P62312 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM6P62312 AC087650.1-201ENST00000431445 468 ntBASIC3.52□□□□□ -1.85
LSM6P62312 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.52□□□□□ -1.85
LSM6P62312 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM6P62312 HMGB1P37-201ENST00000439613 609 ntBASIC3.52□□□□□ -1.85
LSM6P62312 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.52□□□□□ -1.85
LSM6P62312 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM6P62312 AP000873.1-201ENST00000463987 400 ntBASIC3.52□□□□□ -1.85
LSM6P62312 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM6P62312 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.52□□□□□ -1.85
LSM6P62312 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM6P62312 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.52□□□□□ -1.85
LSM6P62312 MIR4700-201ENST00000578311 74 ntBASIC3.52□□□□□ -1.85
LSM6P62312 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.52□□□□□ -1.85
LSM6P62312 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM6P62312 AC244505.7-201ENST00000599675 272 ntBASIC3.52□□□□□ -1.85
LSM6P62312 ARF4P1-201ENST00000605447 541 ntBASIC3.52□□□□□ -1.85
LSM6P62312 AC012213.4-201ENST00000606457 354 ntBASIC3.52□□□□□ -1.85
LSM6P62312 uc_338.9-201ENST00000617424 182 ntBASIC3.52□□□□□ -1.85
LSM6P62312 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.52□□□□□ -1.85
LSM6P62312 OR5BE1P-202ENST00000641168 1176 ntBASIC3.52□□□□□ -1.85
LSM6P62312 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM6P62312 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LSM6P62312 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.52□□□□□ -1.85
LSM6P62312 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
LSM6P62312 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM6P62312 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
LSM6P62312 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
LSM6P62312 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LSM6P62312 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LSM6P62312 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LSM6P62312 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
LSM6P62312 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LSM6P62312 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.51□□□□□ -1.85
LSM6P62312 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
LSM6P62312 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.51□□□□□ -1.85
LSM6P62312 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.51□□□□□ -1.85
LSM6P62312 RPA2P2-201ENST00000419698 796 ntBASIC3.51□□□□□ -1.85
LSM6P62312 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms