Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LSM3P62310 RAB5CP1-201ENST00000395972 580 ntBASIC3.21□□□□□ -1.9
LSM3P62310 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM3P62310 AC245291.1-201ENST00000419501 328 ntBASIC3.21□□□□□ -1.9
LSM3P62310 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM3P62310 AL513174.1-201ENST00000423182 629 ntBASIC3.21□□□□□ -1.9
LSM3P62310 AL049610.1-201ENST00000423374 372 ntBASIC3.21□□□□□ -1.9
LSM3P62310 FTH1P6-201ENST00000430768 320 ntBASIC3.21□□□□□ -1.9
LSM3P62310 RPL12P28-201ENST00000430852 489 ntBASIC3.21□□□□□ -1.9
LSM3P62310 AP000563.1-201ENST00000490865 758 ntBASIC3.21□□□□□ -1.9
LSM3P62310 RPS27AP13-201ENST00000498403 237 ntBASIC3.21□□□□□ -1.9
LSM3P62310 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM3P62310 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM3P62310 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM3P62310 AL121839.1-201ENST00000556233 1185 ntBASIC3.21□□□□□ -1.9
LSM3P62310 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM3P62310 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM3P62310 AP000919.1-202ENST00000581139 1264 ntBASIC3.21□□□□□ -1.9
LSM3P62310 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM3P62310 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM3P62310 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.21□□□□□ -1.9
LSM3P62310 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM3P62310 IPO5P1-202ENST00000600039 287 ntBASIC3.21□□□□□ -1.9
LSM3P62310 FAM25E-202ENST00000608562 189 ntBASIC3.21□□□□□ -1.9
LSM3P62310 AC000123.2-201ENST00000623124 461 ntBASIC3.21□□□□□ -1.9
LSM3P62310 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM3P62310 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM3P62310 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.21□□□□□ -1.9
LSM3P62310 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM3P62310 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM3P62310 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LSM3P62310 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.21□□□□□ -1.9
LSM3P62310 AC007496.3-201ENST00000624987 3443 ntBASIC3.21□□□□□ -1.9
LSM3P62310 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM3P62310 AC058791.1-201ENST00000608412 3198 ntBASIC3.2□□□□□ -1.9
LSM3P62310 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.2□□□□□ -1.9
LSM3P62310 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM3P62310 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM3P62310 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM3P62310 MIR148B-201ENST00000362252 99 ntBASIC3.2□□□□□ -1.9
LSM3P62310 RNA5SP447-201ENST00000363749 119 ntBASIC3.2□□□□□ -1.9
LSM3P62310 RNA5SP366-201ENST00000365454 123 ntBASIC3.2□□□□□ -1.9
LSM3P62310 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
LSM3P62310 MTHFD2P2-201ENST00000407725 247 ntBASIC3.2□□□□□ -1.9
LSM3P62310 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM3P62310 RN7SKP33-201ENST00000410942 340 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AL450992.3-201ENST00000413192 568 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AC126124.2-201ENST00000413542 321 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AC093578.1-201ENST00000415219 368 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AC017079.2-201ENST00000416102 485 ntBASIC3.2□□□□□ -1.9
LSM3P62310 GTF3AP1-201ENST00000416942 1004 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM3P62310 RPL23AP38-201ENST00000423801 469 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AL158073.1-201ENST00000426848 1104 ntBASIC3.2□□□□□ -1.9
LSM3P62310 BX890604.2-201ENST00000427883 474 ntBASIC3.2□□□□□ -1.9
LSM3P62310 ARF4P2-201ENST00000430209 526 ntBASIC3.2□□□□□ -1.9
LSM3P62310 MTND2P2-201ENST00000434633 945 ntBASIC3.2□□□□□ -1.9
LSM3P62310 HMGB3P10-201ENST00000434734 572 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AC105402.2-201ENST00000438503 358 ntBASIC3.2□□□□□ -1.9
LSM3P62310 ACTR3P2-201ENST00000439585 1257 ntBASIC3.2□□□□□ -1.9
LSM3P62310 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM3P62310 CBX1P1-201ENST00000440184 427 ntBASIC3.2□□□□□ -1.9
LSM3P62310 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
LSM3P62310 AC016687.1-201ENST00000482574 353 ntBASIC3.2□□□□□ -1.9
LSM3P62310 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM3P62310 AK3P4-201ENST00000504283 583 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AC093720.1-201ENST00000505681 714 ntBASIC3.2□□□□□ -1.9
LSM3P62310 RNU2-27P-201ENST00000516185 142 ntBASIC3.2□□□□□ -1.9
LSM3P62310 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM3P62310 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AC104027.1-201ENST00000521887 300 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM3P62310 OR7E13P-201ENST00000526052 910 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AC026333.2-201ENST00000542164 106 ntBASIC3.2□□□□□ -1.9
LSM3P62310 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
LSM3P62310 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM3P62310 AC027281.1-201ENST00000574178 758 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AP005901.4-201ENST00000577336 569 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.2□□□□□ -1.9
LSM3P62310 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM3P62310 AC006116.5-201ENST00000591936 559 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM3P62310 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM3P62310 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM3P62310 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.2□□□□□ -1.9
LSM3P62310 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.2□□□□□ -1.9
LSM3P62310 AL161616.1-201ENST00000611867 286 ntBASIC3.2□□□□□ -1.9
LSM3P62310 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.2□□□□□ -1.9
LSM3P62310 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM3P62310 AP000843.1-201ENST00000624880 701 ntBASIC3.2□□□□□ -1.9
LSM3P62310 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.2□□□□□ -1.9
LSM3P62310 MIR4302-201ENST00000638058 60 ntBASIC3.2□□□□□ -1.9
LSM3P62310 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LSM3P62310 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LSM3P62310 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.2□□□□□ -1.9
LSM3P62310 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.19□□□□□ -1.9
LSM3P62310 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LSM3P62310 SNORD56.3-201ENST00000363507 71 ntBASIC3.19□□□□□ -1.9
LSM3P62310 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LSM3P62310 AL136131.1-201ENST00000406079 803 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms