Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PEX3P56589 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.42□□□□□ -1.7
PEX3P56589 AC026951.1-201ENST00000559530 2459 ntBASIC4.42□□□□□ -1.7
PEX3P56589 AC022968.1-201ENST00000567372 442 ntBASIC4.42□□□□□ -1.7
PEX3P56589 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PEX3P56589 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PEX3P56589 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.42□□□□□ -1.7
PEX3P56589 AL356274.1-201ENST00000617064 410 ntBASIC4.42□□□□□ -1.7
PEX3P56589 AC103798.2-201ENST00000624292 632 ntBASIC4.42□□□□□ -1.7
PEX3P56589 AP003400.6-201ENST00000624698 740 ntBASIC4.42□□□□□ -1.7
PEX3P56589 OR5AC4P-202ENST00000642086 985 ntBASIC4.42□□□□□ -1.7
PEX3P56589 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PEX3P56589 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.42□□□□□ -1.7
PEX3P56589 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PEX3P56589 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PEX3P56589 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PEX3P56589 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
PEX3P56589 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PEX3P56589 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.42□□□□□ -1.7
PEX3P56589 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.41□□□□□ -1.7
PEX3P56589 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PEX3P56589 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PEX3P56589 ZNF962P-201ENST00000443465 3140 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AC009501.3-201ENST00000605001 1352 ntBASIC4.41□□□□□ -1.7
PEX3P56589 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
PEX3P56589 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PEX3P56589 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.41□□□□□ -1.7
PEX3P56589 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PEX3P56589 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PEX3P56589 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PEX3P56589 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PEX3P56589 MIR448-201ENST00000362131 111 ntBASIC4.41□□□□□ -1.7
PEX3P56589 RNU6-984P-201ENST00000363236 109 ntBASIC4.41□□□□□ -1.7
PEX3P56589 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PEX3P56589 MIR513A2-201ENST00000385249 127 ntBASIC4.41□□□□□ -1.7
PEX3P56589 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PEX3P56589 MTCO1P54-201ENST00000430139 712 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.41□□□□□ -1.7
PEX3P56589 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.41□□□□□ -1.7
PEX3P56589 MTND2P21-201ENST00000436242 1042 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AL357520.1-201ENST00000441557 453 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AL353898.1-201ENST00000444055 238 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.41□□□□□ -1.7
PEX3P56589 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.41□□□□□ -1.7
PEX3P56589 FABP3P2-201ENST00000453169 399 ntBASIC4.41□□□□□ -1.7
PEX3P56589 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.41□□□□□ -1.7
PEX3P56589 MTND2P6-201ENST00000455337 1030 ntBASIC4.41□□□□□ -1.7
PEX3P56589 RPS4XP15-201ENST00000489210 795 ntBASIC4.41□□□□□ -1.7
PEX3P56589 TPT1P3-201ENST00000492841 512 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.41□□□□□ -1.7
PEX3P56589 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
PEX3P56589 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.41□□□□□ -1.7
PEX3P56589 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.41□□□□□ -1.7
PEX3P56589 AP003049.1-201ENST00000529418 457 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.41□□□□□ -1.7
PEX3P56589 AC091516.1-201ENST00000549191 703 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AC087888.1-201ENST00000550884 1254 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AC084824.1-201ENST00000550917 1005 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.41□□□□□ -1.7
PEX3P56589 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.41□□□□□ -1.7
PEX3P56589 AC068020.1-201ENST00000594215 661 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AC008638.3-201ENST00000603341 463 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AL139395.1-201ENST00000603662 160 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.41□□□□□ -1.7
PEX3P56589 MIR6875-201ENST00000617506 72 ntBASIC4.41□□□□□ -1.7
PEX3P56589 MIR6500-201ENST00000622700 86 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.41□□□□□ -1.7
PEX3P56589 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.41□□□□□ -1.7
PEX3P56589 AL773545.4-201ENST00000637262 310 ntBASIC4.41□□□□□ -1.7
PEX3P56589 AL513478.4-201ENST00000641636 310 ntBASIC4.41□□□□□ -1.7
PEX3P56589 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.41□□□□□ -1.7
PEX3P56589 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.41□□□□□ -1.7
PEX3P56589 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PEX3P56589 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PEX3P56589 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PEX3P56589 AC007342.7-201ENST00000624610 2337 ntBASIC4.4□□□□□ -1.7
PEX3P56589 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.4□□□□□ -1.7
PEX3P56589 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
PEX3P56589 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PEX3P56589 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.4□□□□□ -1.71
PEX3P56589 RNA5SP399-201ENST00000364003 117 ntBASIC4.4□□□□□ -1.71
PEX3P56589 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.4□□□□□ -1.71
PEX3P56589 GCNT6-201ENST00000379591 934 ntBASIC4.4□□□□□ -1.71
PEX3P56589 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PEX3P56589 AL356057.1-202ENST00000402263 756 ntBASIC4.4□□□□□ -1.71
PEX3P56589 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.4□□□□□ -1.71
PEX3P56589 ARL2BPP3-201ENST00000421226 480 ntBASIC4.4□□□□□ -1.71
PEX3P56589 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.4□□□□□ -1.71
PEX3P56589 OR8F1P-201ENST00000425243 930 ntBASIC4.4□□□□□ -1.71
PEX3P56589 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.4□□□□□ -1.71
PEX3P56589 AC108729.2-201ENST00000476543 840 ntBASIC4.4□□□□□ -1.71
PEX3P56589 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.4□□□□□ -1.71
PEX3P56589 RN7SL271P-201ENST00000487601 295 ntBASIC4.4□□□□□ -1.71
PEX3P56589 SUMO1P1-201ENST00000497904 306 ntBASIC4.4□□□□□ -1.71
PEX3P56589 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.4□□□□□ -1.71
PEX3P56589 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.4□□□□□ -1.71
PEX3P56589 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.4□□□□□ -1.71
PEX3P56589 RNA5SP179-201ENST00000517284 121 ntBASIC4.4□□□□□ -1.71
PEX3P56589 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.4□□□□□ -1.71
PEX3P56589 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 555.9 ms