Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 ELL2P4-201ENST00000446870 1376 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SUMO3P55854 Y_RNA.51-201ENST00000362725 102 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SUMO3P55854 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SUMO3P55854 SNORA51.6-201ENST00000384151 125 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 SNORA67-201ENST00000384423 137 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 MIR105-1-201ENST00000385222 81 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 RNU1-77P-201ENST00000390868 162 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 NUDT19P3-201ENST00000404698 555 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 RPL7P8-201ENST00000411964 730 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 NPM1P11-201ENST00000417106 855 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 COX6CP15-201ENST00000426313 211 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SUMO3P55854 MTCO2P16-201ENST00000436962 677 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.84□□□□□ -1.63
SUMO3P55854 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.84□□□□□ -1.63
SUMO3P55854 MTCO2P18-201ENST00000457151 658 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.84□□□□□ -1.63
SUMO3P55854 AC079841.1-201ENST00000481228 950 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SUMO3P55854 AC109486.1-201ENST00000486833 374 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 RN7SKP82-201ENST00000516786 223 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.84□□□□□ -1.63
SUMO3P55854 IGKV2-18-201ENST00000522607 343 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.84□□□□□ -1.63
SUMO3P55854 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.84□□□□□ -1.63
SUMO3P55854 HIGD1AP10-201ENST00000527837 282 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 AC008127.2-201ENST00000549925 1075 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 AC137768.1-201ENST00000549998 553 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 AL049779.2-201ENST00000553847 315 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 HSPE1P3-201ENST00000559254 309 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 NMNAT1P5-201ENST00000559657 841 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 AC084757.1-201ENST00000559987 490 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 AC007225.2-201ENST00000562529 256 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 RPL10P14-201ENST00000565265 298 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 ROCK1P1-201ENST00000573767 549 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 AC136618.2-201ENST00000575091 400 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SUMO3P55854 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SUMO3P55854 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.84□□□□□ -1.63
SUMO3P55854 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.84□□□□□ -1.63
SUMO3P55854 AC104785.1-201ENST00000603220 588 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 AC106028.5-201ENST00000610332 395 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.84□□□□□ -1.63
SUMO3P55854 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SUMO3P55854 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SUMO3P55854 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SUMO3P55854 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.84□□□□□ -1.64
SUMO3P55854 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SUMO3P55854 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
SUMO3P55854 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SUMO3P55854 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.83□□□□□ -1.64
SUMO3P55854 AC023421.1-201ENST00000590535 1785 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
SUMO3P55854 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.83□□□□□ -1.64
SUMO3P55854 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.83□□□□□ -1.64
SUMO3P55854 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.83□□□□□ -1.64
SUMO3P55854 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.83□□□□□ -1.64
SUMO3P55854 AL122126.1-201ENST00000546905 1318 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SUMO3P55854 RNU6-374P-201ENST00000364146 108 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 RNU4-24P-201ENST00000364565 139 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 Y_RNA.436-201ENST00000384097 102 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 RNU6-1226P-201ENST00000384317 107 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 SNORA26.8-201ENST00000391306 124 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SUMO3P55854 HMGB1P17-201ENST00000403495 628 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.83□□□□□ -1.64
SUMO3P55854 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.83□□□□□ -1.64
SUMO3P55854 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.83□□□□□ -1.64
SUMO3P55854 AC069218.2-201ENST00000411665 344 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 TPMTP3-201ENST00000411928 735 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.83□□□□□ -1.64
SUMO3P55854 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SUMO3P55854 NPM1P4-201ENST00000414095 812 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 HSFY4P-201ENST00000415994 1181 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.83□□□□□ -1.64
SUMO3P55854 MTCO2P7-201ENST00000446518 666 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.83□□□□□ -1.64
SUMO3P55854 ARPC3P2-201ENST00000457786 533 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 RPS20P21-201ENST00000466859 343 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 OR2AO1P-201ENST00000476497 403 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 AC058823.1-201ENST00000485315 474 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 AL024509.2-201ENST00000493462 493 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 RPSAP51-201ENST00000497462 645 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.83□□□□□ -1.64
SUMO3P55854 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.83□□□□□ -1.64
SUMO3P55854 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.83□□□□□ -1.64
SUMO3P55854 MTCYBP43-201ENST00000513621 740 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 ATP5LP3-201ENST00000514223 304 ntBASIC4.83□□□□□ -1.64
SUMO3P55854 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms