Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 OR14L1P-202ENST00000641545 3009 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN9P43378 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN9P43378 AC021146.4-201ENST00000309229 279 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 SNORA51.12-201ENST00000384448 134 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 SNORA68.2-201ENST00000391263 128 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AL049697.2-201ENST00000403708 294 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AC016769.2-201ENST00000414815 475 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 MTND2P16-201ENST00000419987 799 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN9P43378 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 HIGD1AP12-201ENST00000427832 281 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 RPL21P91-201ENST00000429231 479 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN9P43378 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN9P43378 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN9P43378 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN9P43378 AC006466.1-201ENST00000438721 289 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 MTCYBP31-201ENST00000438855 1122 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AC092809.1-201ENST00000441469 474 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN9P43378 YWHAQP9-201ENST00000445891 512 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 MTND1P31-201ENST00000449206 961 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN9P43378 AC243772.1-201ENST00000451620 410 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN9P43378 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN9P43378 AL354710.1-201ENST00000453641 246 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 MRPL35P4-201ENST00000453682 566 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AL513533.1-201ENST00000453728 415 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN9P43378 RNU6-1218P-201ENST00000458990 108 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN9P43378 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.79□□□□□ -1.64
PTPN9P43378 AC118282.2-201ENST00000508739 374 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AC113347.3-201ENST00000509113 148 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN9P43378 IGKV2-36-201ENST00000519999 223 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AC008562.1-201ENST00000521763 330 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 COX6B1P6-201ENST00000522347 255 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN9P43378 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN9P43378 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
PTPN9P43378 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.79□□□□□ -1.64
PTPN9P43378 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN9P43378 AC090751.1-201ENST00000566966 267 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN9P43378 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN9P43378 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN9P43378 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN9P43378 GAS5-AS1-201ENST00000602767 694 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 NTAN1P1-201ENST00000603150 646 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AL133338.2-201ENST00000604292 736 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AC021749.1-201ENST00000604322 607 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AL583856.2-201ENST00000606298 543 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AL445423.1-201ENST00000609941 536 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AC004908.3-201ENST00000610248 625 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 MIR6780A-201ENST00000615089 68 ntBASIC4.79□□□□□ -1.64
PTPN9P43378 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
PTPN9P43378 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN9P43378 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN9P43378 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN9P43378 AL672167.1-205ENST00000641112 3080 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN9P43378 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
PTPN9P43378 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
PTPN9P43378 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PTPN9P43378 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN9P43378 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN9P43378 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN9P43378 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN9P43378 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN9P43378 AL445437.1-201ENST00000623157 3087 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN9P43378 RN7SKP103-201ENST00000363848 320 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 RNVU1-6-201ENST00000364688 164 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN9P43378 FCF1P5-201ENST00000406490 482 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 RNU2-6P-201ENST00000411404 190 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 VDAC1P9-201ENST00000412766 841 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 AL139128.1-201ENST00000413921 941 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN9P43378 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN9P43378 AL009174.1-201ENST00000426577 416 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN9P43378 RAC1P8-201ENST00000427086 527 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 CNOT7P1-201ENST00000429006 852 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 RPL21P110-201ENST00000433345 446 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.78□□□□□ -1.64
PTPN9P43378 HMGB1P45-201ENST00000435986 653 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 MTCO2P20-201ENST00000437339 673 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN9P43378 RPS26P30-201ENST00000443431 335 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN9P43378 TPMTP4-201ENST00000450749 678 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.78□□□□□ -1.64
PTPN9P43378 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN9P43378 AC096992.1-201ENST00000459808 709 ntBASIC4.78□□□□□ -1.64
PTPN9P43378 RPL12P20-201ENST00000475538 479 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms