Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC011374.2-201ENST00000607135 526 ntBASIC5.07□□□□□ -1.6
CIITAP33076 AC020634.1-201ENST00000608701 549 ntBASIC5.07□□□□□ -1.6
CIITAP33076 AC116447.1-201ENST00000613153 453 ntBASIC5.07□□□□□ -1.6
CIITAP33076 AP004607.9-201ENST00000618202 316 ntBASIC5.07□□□□□ -1.6
CIITAP33076 AC139769.3-201ENST00000618383 175 ntBASIC5.07□□□□□ -1.6
CIITAP33076 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CIITAP33076 AC012321.1-201ENST00000561622 1588 ntBASIC5.07□□□□□ -1.6
CIITAP33076 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CIITAP33076 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CIITAP33076 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CIITAP33076 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CIITAP33076 MAPK10-349ENST00000641767 3661 ntBASIC5.07□□□□□ -1.6
CIITAP33076 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.06□□□□□ -1.6
CIITAP33076 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CIITAP33076 NEAT1-202ENST00000501122 22743 ntBASIC5.06□□□□□ -1.6
CIITAP33076 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AL450326.2-201ENST00000421913 1962 ntBASIC5.06□□□□□ -1.6
CIITAP33076 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.06□□□□□ -1.6
CIITAP33076 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CIITAP33076 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CIITAP33076 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.06□□□□□ -1.6
CIITAP33076 MTCO2P31-201ENST00000402702 684 ntBASIC5.06□□□□□ -1.6
CIITAP33076 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.06□□□□□ -1.6
CIITAP33076 LINC01347-201ENST00000417964 355 ntBASIC5.06□□□□□ -1.6
CIITAP33076 RPL18P10-201ENST00000425606 538 ntBASIC5.06□□□□□ -1.6
CIITAP33076 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
CIITAP33076 ETF1P3-201ENST00000430422 1160 ntBASIC5.06□□□□□ -1.6
CIITAP33076 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.06□□□□□ -1.6
CIITAP33076 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.06□□□□□ -1.6
CIITAP33076 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CIITAP33076 AC009220.1-201ENST00000451614 275 ntBASIC5.06□□□□□ -1.6
CIITAP33076 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CIITAP33076 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.06□□□□□ -1.6
CIITAP33076 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.06□□□□□ -1.6
CIITAP33076 VN1R40P-201ENST00000455196 941 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AC013356.1-201ENST00000489027 564 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AP000563.1-201ENST00000490865 758 ntBASIC5.06□□□□□ -1.6
CIITAP33076 RPS4XP18-201ENST00000495480 763 ntBASIC5.06□□□□□ -1.6
CIITAP33076 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.06□□□□□ -1.6
CIITAP33076 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.06□□□□□ -1.6
CIITAP33076 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.06□□□□□ -1.6
CIITAP33076 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.06□□□□□ -1.6
CIITAP33076 RAB9BP1-201ENST00000519581 626 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.06□□□□□ -1.6
CIITAP33076 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.06□□□□□ -1.6
CIITAP33076 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.06□□□□□ -1.6
CIITAP33076 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.06□□□□□ -1.6
CIITAP33076 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.06□□□□□ -1.6
CIITAP33076 AC023824.3-201ENST00000569003 562 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.06□□□□□ -1.6
CIITAP33076 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.06□□□□□ -1.6
CIITAP33076 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.06□□□□□ -1.6
CIITAP33076 AC079610.2-201ENST00000604818 690 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AC008966.2-201ENST00000606157 453 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AL008729.2-201ENST00000606393 473 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AC090948.1-201ENST00000607464 549 ntBASIC5.06□□□□□ -1.6
CIITAP33076 OR2BH1P-201ENST00000608850 864 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AC092954.1-201ENST00000609121 445 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AC231759.1-201ENST00000616455 597 ntBASIC5.06□□□□□ -1.6
CIITAP33076 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.06□□□□□ -1.6
CIITAP33076 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CIITAP33076 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
CIITAP33076 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CIITAP33076 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CIITAP33076 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CIITAP33076 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CIITAP33076 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CIITAP33076 LINC01355-201ENST00000566551 5444 ntBASIC5.06□□□□□ -1.6
CIITAP33076 NXPH1-205ENST00000602349 1953 ntBASIC5.05□□□□□ -1.6
CIITAP33076 CCT8P1-201ENST00000413611 1657 ntBASIC5.05□□□□□ -1.6
CIITAP33076 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CIITAP33076 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CIITAP33076 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.05□□□□□ -1.6
CIITAP33076 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.05□□□□□ -1.6
CIITAP33076 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
CIITAP33076 OR5P1P-201ENST00000299512 925 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AC126755.2-208ENST00000327792 462 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AC138969.1-213ENST00000331436 462 ntBASIC5.05□□□□□ -1.6
CIITAP33076 MIR3065-201ENST00000390137 79 ntBASIC5.05□□□□□ -1.6
CIITAP33076 SNORA68.2-201ENST00000391263 128 ntBASIC5.05□□□□□ -1.6
CIITAP33076 HMGB3P31-201ENST00000413333 595 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AL592293.2-201ENST00000422292 996 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AC009480.2-201ENST00000422916 432 ntBASIC5.05□□□□□ -1.6
CIITAP33076 RPL12P34-201ENST00000424532 479 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.05□□□□□ -1.6
CIITAP33076 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.05□□□□□ -1.6
CIITAP33076 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.05□□□□□ -1.6
CIITAP33076 ELOCP10-201ENST00000440624 327 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AC114495.1-201ENST00000441274 436 ntBASIC5.05□□□□□ -1.6
CIITAP33076 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.05□□□□□ -1.6
CIITAP33076 Z83846.1-201ENST00000446798 265 ntBASIC5.05□□□□□ -1.6
CIITAP33076 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CIITAP33076 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.05□□□□□ -1.6
CIITAP33076 RPL7P48-201ENST00000461513 746 ntBASIC5.05□□□□□ -1.6
CIITAP33076 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.05□□□□□ -1.6
CIITAP33076 RPL21P131-201ENST00000497298 483 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AC111193.1-201ENST00000504097 155 ntBASIC5.05□□□□□ -1.6
CIITAP33076 OR51K1P-201ENST00000510214 950 ntBASIC5.05□□□□□ -1.6
CIITAP33076 AC015795.1-201ENST00000513669 327 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms