Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RPL21P133-201ENST00000443666 476 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 RPS20P4-201ENST00000461659 355 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 NDUFB4P12-201ENST00000513465 390 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.43□□□□□ -1.7
CHRNA3P32297 IGKV2-36-201ENST00000519999 223 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.43□□□□□ -1.7
CHRNA3P32297 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.43□□□□□ -1.7
CHRNA3P32297 POLR2KP1-201ENST00000553226 168 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.43□□□□□ -1.7
CHRNA3P32297 AL121594.4-201ENST00000556211 1196 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.43□□□□□ -1.7
CHRNA3P32297 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CHRNA3P32297 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.43□□□□□ -1.7
CHRNA3P32297 AC011477.5-201ENST00000586571 259 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.43□□□□□ -1.7
CHRNA3P32297 IPO5P1-202ENST00000600039 287 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRNA3P32297 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHRNA3P32297 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.43□□□□□ -1.7
CHRNA3P32297 AC103858.2-201ENST00000621471 543 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 AL118508.4-201ENST00000624142 1176 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRNA3P32297 AC140479.6-201ENST00000633535 357 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CHRNA3P32297 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CHRNA3P32297 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.43□□□□□ -1.7
CHRNA3P32297 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRNA3P32297 ZNF962P-201ENST00000443465 3140 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRNA3P32297 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CHRNA3P32297 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CHRNA3P32297 AC026951.1-201ENST00000559530 2459 ntBASIC4.43□□□□□ -1.7
CHRNA3P32297 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA3P32297 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CHRNA3P32297 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.42□□□□□ -1.7
CHRNA3P32297 RNU1-87P-201ENST00000363727 170 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 RNA5SP366-201ENST00000365454 123 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA3P32297 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA3P32297 FABP12P1-201ENST00000401911 322 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 HMGB1P13-201ENST00000406019 642 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 AP000357.1-201ENST00000409926 1165 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 RPL23AP26-201ENST00000412728 464 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA3P32297 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRNA3P32297 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRNA3P32297 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRNA3P32297 RPL23AP52-201ENST00000439311 478 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 RPS15AP29-201ENST00000445539 400 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.42□□□□□ -1.7
CHRNA3P32297 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRNA3P32297 AC017099.1-201ENST00000448261 1028 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 NUTF2P3-201ENST00000448540 384 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 FTH1P2-201ENST00000466086 412 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 AL161747.1-201ENST00000480068 358 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 AC091167.1-201ENST00000492017 396 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.42□□□□□ -1.7
CHRNA3P32297 IGBP1P5-201ENST00000507524 1000 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.42□□□□□ -1.7
CHRNA3P32297 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.42□□□□□ -1.7
CHRNA3P32297 TRAV8-5-201ENST00000537369 341 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRNA3P32297 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRNA3P32297 OR4U1P-201ENST00000554958 912 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRNA3P32297 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.42□□□□□ -1.7
CHRNA3P32297 AC069366.1-201ENST00000583159 838 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.42□□□□□ -1.7
CHRNA3P32297 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CHRNA3P32297 AC073592.7-201ENST00000623659 507 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 AC103798.2-201ENST00000624292 632 ntBASIC4.42□□□□□ -1.7
CHRNA3P32297 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA3P32297 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA3P32297 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CHRNA3P32297 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA3P32297 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA3P32297 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA3P32297 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.42□□□□□ -1.7
CHRNA3P32297 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHRNA3P32297 AC134882.1-201ENST00000603738 1676 ntBASIC4.41□□□□□ -1.7
CHRNA3P32297 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CHRNA3P32297 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA3P32297 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.41□□□□□ -1.7
CHRNA3P32297 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.41□□□□□ -1.7
CHRNA3P32297 OR10J6P-201ENST00000289731 930 ntBASIC4.41□□□□□ -1.7
CHRNA3P32297 RNU1-132P-201ENST00000364300 164 ntBASIC4.41□□□□□ -1.7
CHRNA3P32297 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CHRNA3P32297 HSPD1P16-201ENST00000402302 394 ntBASIC4.41□□□□□ -1.7
CHRNA3P32297 RNU2-17P-201ENST00000410290 190 ntBASIC4.41□□□□□ -1.7
CHRNA3P32297 LINC01347-201ENST00000417964 355 ntBASIC4.41□□□□□ -1.7
CHRNA3P32297 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.41□□□□□ -1.7
CHRNA3P32297 AL031736.2-201ENST00000426573 787 ntBASIC4.41□□□□□ -1.7
CHRNA3P32297 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.41□□□□□ -1.7
CHRNA3P32297 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.41□□□□□ -1.7
CHRNA3P32297 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHRNA3P32297 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.41□□□□□ -1.7
CHRNA3P32297 AC104306.1-201ENST00000449702 371 ntBASIC4.41□□□□□ -1.7
CHRNA3P32297 TPRKBP1-201ENST00000456243 481 ntBASIC4.41□□□□□ -1.7
CHRNA3P32297 RPL37P3-201ENST00000456825 293 ntBASIC4.41□□□□□ -1.7
CHRNA3P32297 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms