Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC13P31276 MFSD8-242ENST00000641690 4199 ntBASIC4.72□□□□□ -1.65
HOXC13P31276 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC13P31276 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXC13P31276 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HOXC13P31276 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.71□□□□□ -1.65
HOXC13P31276 XPOTP1-201ENST00000443317 2398 ntBASIC4.71□□□□□ -1.65
HOXC13P31276 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC13P31276 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HOXC13P31276 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC13P31276 AC005005.4-201ENST00000623789 16698 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC13P31276 AL359837.1-201ENST00000381357 287 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 TMSB10P2-201ENST00000416049 131 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC13P31276 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC13P31276 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC13P31276 VN1R42P-201ENST00000424651 344 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 RPL21P91-201ENST00000429231 479 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC13P31276 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC13P31276 FTH1P6-201ENST00000430768 320 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC13P31276 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC13P31276 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC13P31276 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC13P31276 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC13P31276 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC13P31276 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.71□□□□□ -1.66
HOXC13P31276 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC13P31276 AC020593.1-201ENST00000507399 299 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC13P31276 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC13P31276 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HOXC13P31276 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC13P31276 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC13P31276 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC13P31276 AP000919.1-202ENST00000581139 1264 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 BNIP3P39-201ENST00000601077 554 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 NTAN1P1-201ENST00000603150 646 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 AC023509.5-201ENST00000617434 807 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXC13P31276 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HOXC13P31276 AC008785.1-201ENST00000624475 456 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 MIR4496-201ENST00000635896 61 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 AC006927.4-201ENST00000639187 543 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 AC012020.1-201ENST00000624541 1728 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC13P31276 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC13P31276 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
HOXC13P31276 MTCO1P18-201ENST00000455518 1419 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC13P31276 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC13P31276 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC13P31276 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXC13P31276 CPHL1P-201ENST00000461341 3407 ntBASIC4.71□□□□□ -1.66
HOXC13P31276 SMG1P4-204ENST00000523028 4131 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXC13P31276 LINC00622-201ENST00000562811 1570 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 AC095050.2-201ENST00000510748 1458 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC13P31276 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HOXC13P31276 MIR16-2-201ENST00000362117 81 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 RNU6-609P-201ENST00000365459 107 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC13P31276 SNORA51.12-201ENST00000384448 134 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 SNORA70E-201ENST00000384492 135 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 RNU6-1005P-201ENST00000384519 107 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 SNORA40.4-201ENST00000390971 128 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 RNU6-796P-201ENST00000391086 107 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 DNAJC19P6-201ENST00000401853 280 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 ATF1P1-201ENST00000406040 927 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 MTATP6P31-201ENST00000406985 692 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 MIR1303-201ENST00000408625 86 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 CYCSP10-201ENST00000417973 294 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC13P31276 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC13P31276 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC13P31276 RPS29P17-201ENST00000430795 166 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC13P31276 RPS7P5-201ENST00000441482 581 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC13P31276 YWHAQP9-201ENST00000445891 512 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC13P31276 AC034236.1-201ENST00000469891 373 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 RPL7L1P13-201ENST00000511702 739 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC13P31276 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC13P31276 RN7SKP234-201ENST00000517173 224 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 RN7SKP283-201ENST00000517197 270 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 AP000827.1-201ENST00000527814 258 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC13P31276 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.7□□□□□ -1.66
HOXC13P31276 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC13P31276 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.7□□□□□ -1.66
HOXC13P31276 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC13P31276 MIR4429-201ENST00000580105 73 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC13P31276 AC090948.1-201ENST00000607464 549 ntBASIC4.7□□□□□ -1.66
HOXC13P31276 AC004908.3-201ENST00000610248 625 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms