Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.32□□□□□ -1.56
POLR2AP24928 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.32□□□□□ -1.56
POLR2AP24928 AC108734.3-201ENST00000481241 1165 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 RNU6-759P-201ENST00000516740 103 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 Y_RNA.719-201ENST00000517156 106 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.32□□□□□ -1.56
POLR2AP24928 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.32□□□□□ -1.56
POLR2AP24928 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.32□□□□□ -1.56
POLR2AP24928 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.32□□□□□ -1.56
POLR2AP24928 NDUFS5P6-201ENST00000529136 295 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
POLR2AP24928 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.32□□□□□ -1.56
POLR2AP24928 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.32□□□□□ -1.56
POLR2AP24928 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.32□□□□□ -1.56
POLR2AP24928 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.32□□□□□ -1.56
POLR2AP24928 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.32□□□□□ -1.56
POLR2AP24928 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.32□□□□□ -1.56
POLR2AP24928 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.32□□□□□ -1.56
POLR2AP24928 Z82195.1-201ENST00000604558 398 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 AP003392.5-201ENST00000607857 415 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 AL135786.2-201ENST00000608422 615 ntBASIC5.32□□□□□ -1.56
POLR2AP24928 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
POLR2AP24928 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
POLR2AP24928 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.32□□□□□ -1.56
POLR2AP24928 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
POLR2AP24928 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
POLR2AP24928 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
POLR2AP24928 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
POLR2AP24928 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.31□□□□□ -1.56
POLR2AP24928 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
POLR2AP24928 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.31□□□□□ -1.56
POLR2AP24928 RNU6-1320P-201ENST00000390838 107 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 RNU6-1269P-201ENST00000391139 107 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 SDHCP2-201ENST00000398565 501 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.31□□□□□ -1.56
POLR2AP24928 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.31□□□□□ -1.56
POLR2AP24928 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.31□□□□□ -1.56
POLR2AP24928 CYCSP24-201ENST00000445119 316 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 RPL31P20-201ENST00000449593 360 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 RNU6-599P-201ENST00000459383 107 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 RNU6-1193P-201ENST00000459461 107 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.31□□□□□ -1.56
POLR2AP24928 AC007115.1-201ENST00000546853 234 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.31□□□□□ -1.56
POLR2AP24928 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.31□□□□□ -1.56
POLR2AP24928 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.31□□□□□ -1.56
POLR2AP24928 AC074051.3-201ENST00000570238 358 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AC103591.3-201ENST00000608684 209 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 TUSC7.1-201ENST00000610969 165 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 uc_338.13-201ENST00000618243 179 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 U6.42-201ENST00000618440 107 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 RNU6-368P-201ENST00000620928 107 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AL357559.1-201ENST00000622228 274 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 RNU6-538P-201ENST00000622329 107 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.31□□□□□ -1.56
POLR2AP24928 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.31□□□□□ -1.56
POLR2AP24928 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
POLR2AP24928 MFSD8-245ENST00000641743 948 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
POLR2AP24928 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.31□□□□□ -1.56
POLR2AP24928 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
POLR2AP24928 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
POLR2AP24928 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
POLR2AP24928 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
POLR2AP24928 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
POLR2AP24928 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.31□□□□□ -1.56
POLR2AP24928 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
POLR2AP24928 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
POLR2AP24928 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.31□□□□□ -1.56
POLR2AP24928 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
POLR2AP24928 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.31□□□□□ -1.56
POLR2AP24928 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.31□□□□□ -1.56
POLR2AP24928 AL049737.1-201ENST00000413920 1403 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
POLR2AP24928 Y_RNA.201-201ENST00000364052 96 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
POLR2AP24928 MIR3065-201ENST00000390137 79 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.31□□□□□ -1.56
POLR2AP24928 AL049610.1-201ENST00000423374 372 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 TAF9P1-201ENST00000445421 515 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.31□□□□□ -1.56
POLR2AP24928 CCRL1P1-201ENST00000449542 1053 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 RPL23AP23-201ENST00000452590 471 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 RPS27AP8-201ENST00000452665 445 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 TAF9P2-201ENST00000454958 515 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.31□□□□□ -1.56
POLR2AP24928 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.31□□□□□ -1.56
POLR2AP24928 OR5H3P-201ENST00000502817 919 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.31□□□□□ -1.56
POLR2AP24928 AC067904.2-201ENST00000517322 1283 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.31□□□□□ -1.56
POLR2AP24928 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
POLR2AP24928 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.31□□□□□ -1.56
POLR2AP24928 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.31□□□□□ -1.56
POLR2AP24928 AL031985.2-201ENST00000600955 480 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AC073648.5-201ENST00000603502 305 ntBASIC5.31□□□□□ -1.56
POLR2AP24928 AC021749.1-201ENST00000604322 607 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms