Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PSMA2P1-201ENST00000526365 646 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 AP003072.2-201ENST00000527756 676 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.32□□□□□ -1.4
NFKB1P19838 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.32□□□□□ -1.4
NFKB1P19838 HMGB1P6-201ENST00000569046 646 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC6.32□□□□□ -1.4
NFKB1P19838 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.32□□□□□ -1.4
NFKB1P19838 AC009597.2-201ENST00000604659 592 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 AL136097.3-201ENST00000611097 505 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 AL137067.2-201ENST00000621202 131 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.32□□□□□ -1.4
NFKB1P19838 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 AP000547.3-204ENST00000588548 2523 ntBASIC6.32□□□□□ -1.4
NFKB1P19838 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NFKB1P19838 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
NFKB1P19838 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.31□□□□□ -1.4
NFKB1P19838 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.31□□□□□ -1.4
NFKB1P19838 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.31□□□□□ -1.4
NFKB1P19838 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.31□□□□□ -1.4
NFKB1P19838 AL512646.1-201ENST00000269395 1077 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NFKB1P19838 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.31□□□□□ -1.4
NFKB1P19838 RNU6-730P-201ENST00000383954 104 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
NFKB1P19838 AL136116.1-201ENST00000403591 381 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 NPM1P38-201ENST00000403835 865 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 RNA5SP251-201ENST00000410614 137 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 RPL35AP24-201ENST00000413846 330 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.31□□□□□ -1.4
NFKB1P19838 Z82198.3-201ENST00000421145 199 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.31□□□□□ -1.4
NFKB1P19838 AC073069.1-201ENST00000428657 441 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.31□□□□□ -1.4
NFKB1P19838 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.31□□□□□ -1.4
NFKB1P19838 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.31□□□□□ -1.4
NFKB1P19838 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.31□□□□□ -1.4
NFKB1P19838 AC002075.1-201ENST00000457396 676 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 RNU6-329P-201ENST00000459618 107 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 RPL7P15-201ENST00000461190 712 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AL163540.1-201ENST00000485382 386 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AC108693.1-201ENST00000496068 432 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC6.31□□□□□ -1.4
NFKB1P19838 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.31□□□□□ -1.4
NFKB1P19838 HMGN1P16-201ENST00000508308 283 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AC093677.1-201ENST00000514414 678 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 RNU4-49P-201ENST00000516080 140 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.31□□□□□ -1.4
NFKB1P19838 AC008562.1-201ENST00000521763 330 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 PMS2P3-207ENST00000529061 717 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.31□□□□□ -1.4
NFKB1P19838 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.31□□□□□ -1.4
NFKB1P19838 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.31□□□□□ -1.4
NFKB1P19838 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.31□□□□□ -1.4
NFKB1P19838 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 AC020916.2-201ENST00000591242 360 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NFKB1P19838 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 RPSAP75-201ENST00000605848 301 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AC103710.3-201ENST00000608157 948 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.31□□□□□ -1.4
NFKB1P19838 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.31□□□□□ -1.4
NFKB1P19838 RBPJP7-201ENST00000442803 1447 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 RBPJP5-201ENST00000449433 1447 ntBASIC6.31□□□□□ -1.4
NFKB1P19838 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NFKB1P19838 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.31□□□□□ -1.4
NFKB1P19838 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.31□□□□□ -1.4
NFKB1P19838 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NFKB1P19838 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms