Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGA1P17096 PLGLA-201ENST00000465668 449 ntBASIC3.79□□□□□ -1.8
HMGA1P17096 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGA1P17096 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGA1P17096 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGA1P17096 AC103843.2-201ENST00000530523 682 ntBASIC3.79□□□□□ -1.8
HMGA1P17096 AC022882.1-201ENST00000532142 501 ntBASIC3.79□□□□□ -1.8
HMGA1P17096 AC023161.2-201ENST00000551218 780 ntBASIC3.79□□□□□ -1.8
HMGA1P17096 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.79□□□□□ -1.8
HMGA1P17096 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.79□□□□□ -1.8
HMGA1P17096 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGA1P17096 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.79□□□□□ -1.8
HMGA1P17096 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGA1P17096 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HMGA1P17096 MTCO1P7-201ENST00000419523 1542 ntBASIC3.79□□□□□ -1.8
HMGA1P17096 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HMGA1P17096 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.79□□□□□ -1.8
HMGA1P17096 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
HMGA1P17096 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGA1P17096 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HMGA1P17096 AC083899.2-201ENST00000423285 1376 ntBASIC3.78□□□□□ -1.8
HMGA1P17096 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
HMGA1P17096 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGA1P17096 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGA1P17096 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGA1P17096 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGA1P17096 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGA1P17096 RNU6-761P-201ENST00000384148 107 ntBASIC3.78□□□□□ -1.8
HMGA1P17096 SNORA11.1-201ENST00000408133 129 ntBASIC3.78□□□□□ -1.8
HMGA1P17096 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGA1P17096 HMGB3P20-201ENST00000417997 600 ntBASIC3.78□□□□□ -1.8
HMGA1P17096 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGA1P17096 ATP5JP1-201ENST00000431631 322 ntBASIC3.78□□□□□ -1.8
HMGA1P17096 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.78□□□□□ -1.8
HMGA1P17096 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGA1P17096 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGA1P17096 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGA1P17096 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGA1P17096 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGA1P17096 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGA1P17096 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.78□□□□□ -1.8
HMGA1P17096 AC006116.10-201ENST00000591836 581 ntBASIC3.78□□□□□ -1.8
HMGA1P17096 AC069209.1-201ENST00000619282 651 ntBASIC3.78□□□□□ -1.8
HMGA1P17096 AC103858.2-201ENST00000621471 543 ntBASIC3.78□□□□□ -1.8
HMGA1P17096 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.78□□□□□ -1.8
HMGA1P17096 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGA1P17096 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HMGA1P17096 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
HMGA1P17096 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
HMGA1P17096 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.77□□□□□ -1.81
HMGA1P17096 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGA1P17096 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGA1P17096 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGA1P17096 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGA1P17096 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HMGA1P17096 MTHFD2P2-201ENST00000407725 247 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGA1P17096 AL590609.2-201ENST00000421430 368 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 SDCBPP2-201ENST00000424643 885 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 AC097713.2-201ENST00000430199 356 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 RPL7P4-203ENST00000430239 730 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 YWHAEP5-201ENST00000431545 765 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGA1P17096 RPSAP41-201ENST00000439695 860 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 AC010655.1-201ENST00000449336 292 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 NPM1P39-201ENST00000449818 867 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 CYCSP35-201ENST00000451978 304 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 AC139783.2-201ENST00000504847 1145 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 WBP1LP4-201ENST00000505043 344 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGA1P17096 AC074250.1-201ENST00000511117 192 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGA1P17096 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGA1P17096 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGA1P17096 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.77□□□□□ -1.81
HMGA1P17096 AL139395.1-201ENST00000603662 160 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 AC133552.5-201ENST00000604266 540 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 ELOCP35-201ENST00000604289 336 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGA1P17096 AL732618.1-201ENST00000623251 301 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 AC091905.1-201ENST00000624400 311 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HMGA1P17096 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.77□□□□□ -1.81
HMGA1P17096 AC009229.4-201ENST00000623854 1947 ntBASIC3.77□□□□□ -1.81
HMGA1P17096 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HMGA1P17096 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HMGA1P17096 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HMGA1P17096 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HMGA1P17096 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HMGA1P17096 RNA5SP72-201ENST00000364442 117 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HMGA1P17096 RNVU1-14-201ENST00000384770 164 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 AC007068.1-201ENST00000396690 844 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 RN7SKP177-201ENST00000410567 355 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 RPS7P15-201ENST00000415804 584 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 NANOGP6-201ENST00000429190 847 ntBASIC3.76□□□□□ -1.81
HMGA1P17096 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.76□□□□□ -1.81
HMGA1P17096 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.76□□□□□ -1.81
HMGA1P17096 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.76□□□□□ -1.81
HMGA1P17096 HMGB3P22-202ENST00000451823 572 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms