Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL021997.2-201ENST00000615674 271 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AL158196.1-201ENST00000616786 434 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AC006249.1-201ENST00000621223 471 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 CDRT1-208ENST00000630868 794 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 AC009452.1-201ENST00000640823 606 ntBASIC4.57□□□□□ -1.68
PDGFRAP16234 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PDGFRAP16234 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PDGFRAP16234 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.57□□□□□ -1.68
PDGFRAP16234 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PDGFRAP16234 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFRAP16234 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PDGFRAP16234 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFRAP16234 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
PDGFRAP16234 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFRAP16234 AL049737.1-201ENST00000413920 1403 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFRAP16234 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFRAP16234 AL133243.3-201ENST00000617415 3004 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PDGFRAP16234 RNA5SP509-201ENST00000364577 119 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 SNORA62-201ENST00000365493 153 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 AC097374.1-203ENST00000400783 485 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 MTATP6P31-201ENST00000406985 692 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFRAP16234 AC073335.1-201ENST00000427776 363 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFRAP16234 AL132765.1-201ENST00000434165 553 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 CEACAMP1-201ENST00000434624 1035 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 RPS7P5-201ENST00000441482 581 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 AL158053.1-201ENST00000441503 453 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 YWHAQP9-201ENST00000445891 512 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 PHBP16-201ENST00000446318 950 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.56□□□□□ -1.68
PDGFRAP16234 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFRAP16234 RPL7P22-201ENST00000466005 733 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFRAP16234 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.56□□□□□ -1.68
PDGFRAP16234 AC008694.2-201ENST00000517591 306 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 AC010476.1-201ENST00000519111 851 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
PDGFRAP16234 AC008562.1-201ENST00000521763 330 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 AP003717.3-201ENST00000544832 1180 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFRAP16234 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFRAP16234 NF1P5-201ENST00000588287 448 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFRAP16234 PCNAP1-202ENST00000595299 752 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFRAP16234 uc_338.13-201ENST00000618243 179 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 AL121890.3-201ENST00000618494 516 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PDGFRAP16234 AC138907.10-201ENST00000623708 983 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 AC011944.2-201ENST00000624440 683 ntBASIC4.56□□□□□ -1.68
PDGFRAP16234 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFRAP16234 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFRAP16234 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFRAP16234 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFRAP16234 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.55□□□□□ -1.68
PDGFRAP16234 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDGFRAP16234 RNU1-15P-201ENST00000353977 144 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 RNA5SP175-201ENST00000364275 119 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 AL603766.1-201ENST00000407763 664 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 SNORA11F-201ENST00000408237 128 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFRAP16234 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFRAP16234 SKP1P3-201ENST00000429280 487 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.55□□□□□ -1.68
PDGFRAP16234 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFRAP16234 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFRAP16234 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFRAP16234 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFRAP16234 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 AC023050.1-201ENST00000498198 304 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFRAP16234 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFRAP16234 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.55□□□□□ -1.68
PDGFRAP16234 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.55□□□□□ -1.68
PDGFRAP16234 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFRAP16234 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.55□□□□□ -1.68
PDGFRAP16234 ATP5F1P7-201ENST00000567330 760 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 AC090079.2-201ENST00000575289 768 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 MIR4458-201ENST00000578872 75 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 MTATP6P2-201ENST00000603319 678 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 AC113403.1-201ENST00000604910 193 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 BNIP3P19-201ENST00000605397 577 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.55□□□□□ -1.68
PDGFRAP16234 AC021851.1-201ENST00000608537 1082 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 AC096586.1-201ENST00000610267 561 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.55□□□□□ -1.68
PDGFRAP16234 AC083809.1-201ENST00000615051 472 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 AC023509.5-201ENST00000617434 807 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 AC068880.4-201ENST00000623082 495 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PDGFRAP16234 AP002371.2-201ENST00000624450 503 ntBASIC4.55□□□□□ -1.68
PDGFRAP16234 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.55□□□□□ -1.68
PDGFRAP16234 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFRAP16234 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms