Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 AL512353.3-201ENST00000417517 1326 ntBASIC8.24□□□□□ -1.09
CD44P16070 AL513523.1-201ENST00000417868 1309 ntBASIC8.24□□□□□ -1.09
CD44P16070 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
CD44P16070 AC006116.1-201ENST00000587908 2171 ntBASIC8.24□□□□□ -1.09
CD44P16070 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CD44P16070 GTF2IP1-202ENST00000614592 2047 ntBASIC8.24□□□□□ -1.09
CD44P16070 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CD44P16070 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC8.23□□□□□ -1.09
CD44P16070 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.23□□□□□ -1.09
CD44P16070 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.23□□□□□ -1.09
CD44P16070 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CD44P16070 AP002364.1-201ENST00000623330 3386 ntBASIC8.23□□□□□ -1.09
CD44P16070 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.23□□□□□ -1.09
CD44P16070 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.82-201ENST00000363000 102 ntBASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.92-201ENST00000363043 102 ntBASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.235-201ENST00000364412 102 ntBASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.306-201ENST00000365015 102 ntBASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.308-201ENST00000365043 101 ntBASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.312-201ENST00000365089 102 ntBASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.322-201ENST00000365151 102 ntBASIC8.23□□□□□ -1.09
CD44P16070 RNU5E-6P-201ENST00000365574 115 ntBASIC8.23□□□□□ -1.09
CD44P16070 CRP-202ENST00000368110 667 ntTSL 3 BASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.504-201ENST00000384481 104 ntBASIC8.23□□□□□ -1.09
CD44P16070 SNORA2C-201ENST00000408564 137 ntBASIC8.23□□□□□ -1.09
CD44P16070 U3.42-201ENST00000408746 214 ntBASIC8.23□□□□□ -1.09
CD44P16070 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC8.23□□□□□ -1.09
CD44P16070 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC8.23□□□□□ -1.09
CD44P16070 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CD44P16070 SS18L2P1-201ENST00000445923 213 ntBASIC8.23□□□□□ -1.09
CD44P16070 HSPE1P25-201ENST00000455484 251 ntBASIC8.23□□□□□ -1.09
CD44P16070 CHIAP1-201ENST00000456220 995 ntBASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.650-201ENST00000459002 102 ntBASIC8.23□□□□□ -1.09
CD44P16070 RNU6-1211P-201ENST00000459179 105 ntBASIC8.23□□□□□ -1.09
CD44P16070 AC117395.2-201ENST00000463122 1128 ntBASIC8.23□□□□□ -1.09
CD44P16070 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC8.23□□□□□ -1.09
CD44P16070 AC026336.1-201ENST00000466577 351 ntBASIC8.23□□□□□ -1.09
CD44P16070 AC007998.1-201ENST00000474156 672 ntBASIC8.23□□□□□ -1.09
CD44P16070 RN7SL241P-201ENST00000482973 236 ntBASIC8.23□□□□□ -1.09
CD44P16070 RNA5SP422-201ENST00000516778 111 ntBASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.777-201ENST00000516982 102 ntBASIC8.23□□□□□ -1.09
CD44P16070 AC063949.1-201ENST00000552900 865 ntBASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.771-201ENST00000598668 102 ntBASIC8.23□□□□□ -1.09
CD44P16070 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC8.23□□□□□ -1.09
CD44P16070 AC005790.1-201ENST00000619774 450 ntBASIC8.23□□□□□ -1.09
CD44P16070 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CD44P16070 Y_RNA.789-201ENST00000622480 102 ntBASIC8.23□□□□□ -1.09
CD44P16070 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
CD44P16070 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC8.23□□□□□ -1.09
CD44P16070 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.23□□□□□ -1.09
CD44P16070 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 AC135776.4-201ENST00000624300 1904 ntBASIC8.23□□□□□ -1.09
CD44P16070 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CD44P16070 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 AL139805.2-201ENST00000455305 2433 ntBASIC8.22□□□□□ -1.09
CD44P16070 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.22□□□□□ -1.09
CD44P16070 FANCD2P2-201ENST00000437591 1400 ntBASIC8.22□□□□□ -1.09
CD44P16070 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CD44P16070 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.22□□□□□ -1.09
CD44P16070 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC8.22□□□□□ -1.09
CD44P16070 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 RNU4-90P-201ENST00000362773 141 ntBASIC8.22□□□□□ -1.09
CD44P16070 RNA5SP79-201ENST00000365193 109 ntBASIC8.22□□□□□ -1.09
CD44P16070 MIR539-201ENST00000365690 78 ntBASIC8.22□□□□□ -1.09
CD44P16070 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CD44P16070 Y_RNA.563-201ENST00000384707 108 ntBASIC8.22□□□□□ -1.09
CD44P16070 RNU6-278P-201ENST00000390945 109 ntBASIC8.22□□□□□ -1.09
CD44P16070 RPL24P7-201ENST00000399435 453 ntBASIC8.22□□□□□ -1.09
CD44P16070 RPSAP42-201ENST00000403415 878 ntBASIC8.22□□□□□ -1.09
CD44P16070 RN7SKP108-201ENST00000411367 328 ntBASIC8.22□□□□□ -1.09
CD44P16070 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC8.22□□□□□ -1.09
CD44P16070 TMEM167AP1-201ENST00000423409 219 ntBASIC8.22□□□□□ -1.09
CD44P16070 PRUNEP1-201ENST00000425846 705 ntBASIC8.22□□□□□ -1.09
CD44P16070 AC079807.1-201ENST00000429993 481 ntBASIC8.22□□□□□ -1.09
CD44P16070 KRT18P53-201ENST00000431919 117 ntBASIC8.22□□□□□ -1.09
CD44P16070 AC073410.1-201ENST00000435125 589 ntBASIC8.22□□□□□ -1.09
CD44P16070 UBE2V1P13-201ENST00000436983 439 ntBASIC8.22□□□□□ -1.09
CD44P16070 RPS10P3-201ENST00000439253 494 ntBASIC8.22□□□□□ -1.09
CD44P16070 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC8.22□□□□□ -1.09
CD44P16070 TCEAL4P1-201ENST00000453620 588 ntBASIC8.22□□□□□ -1.09
CD44P16070 MRPS21P1-201ENST00000453850 223 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms