Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.96□□□□□ -1.46
ITGA4P13612 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ITGA4P13612 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ITGA4P13612 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.96□□□□□ -1.46
ITGA4P13612 AL031985.3-201ENST00000565390 2449 ntBASIC5.96□□□□□ -1.46
ITGA4P13612 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
ITGA4P13612 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ITGA4P13612 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.95□□□□□ -1.46
ITGA4P13612 CDC27P2-201ENST00000425026 1922 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
ITGA4P13612 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
ITGA4P13612 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
ITGA4P13612 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ITGA4P13612 ZNF37BP-203ENST00000452306 1352 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ITGA4P13612 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ITGA4P13612 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ITGA4P13612 MIR133B-201ENST00000362210 119 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 SNORA74A-201ENST00000364089 198 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ITGA4P13612 RNU5A-6P-201ENST00000384136 116 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 SNORA51.12-201ENST00000384448 134 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 RPL17P50-201ENST00000396131 546 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AL133388.1-201ENST00000404509 287 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.95□□□□□ -1.46
ITGA4P13612 HMGN1P14-201ENST00000412459 517 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 FCF1P2-201ENST00000415284 583 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AC092634.6-201ENST00000418558 192 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 LINC00993-201ENST00000420453 540 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 OFD1P18Y-201ENST00000420889 959 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 MTCO3P1-205ENST00000422088 832 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
ITGA4P13612 MRPS21P2-201ENST00000424704 264 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.95□□□□□ -1.46
ITGA4P13612 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.95□□□□□ -1.46
ITGA4P13612 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.95□□□□□ -1.46
ITGA4P13612 BMS1P19-201ENST00000433925 393 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.95□□□□□ -1.46
ITGA4P13612 AL022238.1-201ENST00000442557 355 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.95□□□□□ -1.46
ITGA4P13612 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.95□□□□□ -1.46
ITGA4P13612 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.95□□□□□ -1.46
ITGA4P13612 WASF1P1-201ENST00000447560 1131 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 RPS27AP15-201ENST00000447672 466 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 PAXBP1P1-201ENST00000449315 447 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.95□□□□□ -1.46
ITGA4P13612 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.95□□□□□ -1.46
ITGA4P13612 AC072052.1-201ENST00000496556 306 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AC008953.1-201ENST00000497334 318 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.95□□□□□ -1.46
ITGA4P13612 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ITGA4P13612 MTND6P2-201ENST00000512226 524 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 RNU6-314P-201ENST00000516574 104 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.95□□□□□ -1.46
ITGA4P13612 HIGD1AP6-201ENST00000521833 279 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.95□□□□□ -1.46
ITGA4P13612 AP002748.2-201ENST00000528671 348 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.95□□□□□ -1.46
ITGA4P13612 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.95□□□□□ -1.46
ITGA4P13612 AC044860.2-201ENST00000561005 179 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AC136618.2-201ENST00000575091 400 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 SNORA59B-202ENST00000578183 701 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AC091135.1-201ENST00000585943 307 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ITGA4P13612 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.95□□□□□ -1.46
ITGA4P13612 LSM1P2-201ENST00000604911 322 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AC069304.2-201ENST00000605154 435 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 IMMP1LP1-201ENST00000605170 488 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AC010857.1-201ENST00000606398 594 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 RNU6-88P-201ENST00000606801 100 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.95□□□□□ -1.46
ITGA4P13612 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AC027807.2-201ENST00000616099 408 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 AL359314.1-201ENST00000616913 261 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 uc_338.9-201ENST00000617424 182 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ITGA4P13612 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
ITGA4P13612 OR4F13P-202ENST00000560066 2054 ntBASIC5.95□□□□□ -1.46
ITGA4P13612 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ITGA4P13612 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
ITGA4P13612 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ITGA4P13612 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ITGA4P13612 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.94□□□□□ -1.46
ITGA4P13612 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ITGA4P13612 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ITGA4P13612 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
ITGA4P13612 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
ITGA4P13612 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ITGA4P13612 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ITGA4P13612 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ITGA4P13612 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ITGA4P13612 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
ITGA4P13612 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ITGA4P13612 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ITGA4P13612 AC093671.1-201ENST00000624981 2929 ntBASIC5.94□□□□□ -1.46
ITGA4P13612 Y_RNA.303-201ENST00000364998 94 ntBASIC5.94□□□□□ -1.46
ITGA4P13612 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.94□□□□□ -1.46
ITGA4P13612 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ITGA4P13612 SNORA5.1-201ENST00000384275 131 ntBASIC5.94□□□□□ -1.46
ITGA4P13612 RNU6-1122P-201ENST00000384449 107 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms