Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.21□□□□□ -1.9
CD28P10747 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CD28P10747 AC048351.1-201ENST00000420064 602 ntBASIC3.21□□□□□ -1.9
CD28P10747 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CD28P10747 RPS12P5-201ENST00000423449 371 ntBASIC3.21□□□□□ -1.9
CD28P10747 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.21□□□□□ -1.9
CD28P10747 OR5BE1P-201ENST00000425977 939 ntBASIC3.21□□□□□ -1.9
CD28P10747 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.21□□□□□ -1.9
CD28P10747 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.21□□□□□ -1.9
CD28P10747 RPS20P1-201ENST00000434853 354 ntBASIC3.21□□□□□ -1.9
CD28P10747 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.21□□□□□ -1.9
CD28P10747 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CD28P10747 AC006011.1-201ENST00000442758 349 ntBASIC3.21□□□□□ -1.9
CD28P10747 RPS4XP4-201ENST00000443195 763 ntBASIC3.21□□□□□ -1.9
CD28P10747 AC023512.1-201ENST00000444513 499 ntBASIC3.21□□□□□ -1.9
CD28P10747 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CD28P10747 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.21□□□□□ -1.9
CD28P10747 AL162388.1-201ENST00000450912 352 ntBASIC3.21□□□□□ -1.9
CD28P10747 EIF4A1P11-201ENST00000451239 222 ntBASIC3.21□□□□□ -1.9
CD28P10747 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.21□□□□□ -1.9
CD28P10747 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.21□□□□□ -1.9
CD28P10747 GAPDHP36-201ENST00000480688 918 ntBASIC3.21□□□□□ -1.9
CD28P10747 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.21□□□□□ -1.9
CD28P10747 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CD28P10747 AC108157.1-201ENST00000510511 539 ntBASIC3.21□□□□□ -1.9
CD28P10747 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.21□□□□□ -1.9
CD28P10747 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.21□□□□□ -1.9
CD28P10747 SNORA67.7-201ENST00000516664 135 ntBASIC3.21□□□□□ -1.9
CD28P10747 VTA1P2-201ENST00000520205 911 ntBASIC3.21□□□□□ -1.9
CD28P10747 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.21□□□□□ -1.9
CD28P10747 IGLV3-26-201ENST00000520756 302 ntBASIC3.21□□□□□ -1.9
CD28P10747 IFITM8P-201ENST00000522529 394 ntBASIC3.21□□□□□ -1.9
CD28P10747 AC090819.1-201ENST00000523800 1111 ntBASIC3.21□□□□□ -1.9
CD28P10747 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.21□□□□□ -1.9
CD28P10747 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.21□□□□□ -1.9
CD28P10747 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CD28P10747 AC008083.2-201ENST00000546707 476 ntBASIC3.21□□□□□ -1.9
CD28P10747 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.21□□□□□ -1.9
CD28P10747 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.21□□□□□ -1.9
CD28P10747 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.21□□□□□ -1.9
CD28P10747 MIR3158-1-201ENST00000583596 81 ntBASIC3.21□□□□□ -1.9
CD28P10747 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.21□□□□□ -1.9
CD28P10747 AC090953.1-201ENST00000604305 1092 ntBASIC3.21□□□□□ -1.9
CD28P10747 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.21□□□□□ -1.9
CD28P10747 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.21□□□□□ -1.9
CD28P10747 AC016957.2-201ENST00000616998 848 ntBASIC3.21□□□□□ -1.9
CD28P10747 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.21□□□□□ -1.9
CD28P10747 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.21□□□□□ -1.9
CD28P10747 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CD28P10747 OR5BE1P-202ENST00000641168 1176 ntBASIC3.21□□□□□ -1.9
CD28P10747 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CD28P10747 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.21□□□□□ -1.9
CD28P10747 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.21□□□□□ -1.9
CD28P10747 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CD28P10747 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CD28P10747 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CD28P10747 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CD28P10747 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD28P10747 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CD28P10747 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD28P10747 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.2□□□□□ -1.9
CD28P10747 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CD28P10747 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CD28P10747 MIR670-201ENST00000390142 98 ntBASIC3.2□□□□□ -1.9
CD28P10747 HSPD1P16-201ENST00000402302 394 ntBASIC3.2□□□□□ -1.9
CD28P10747 RNA5SP498-201ENST00000411342 120 ntBASIC3.2□□□□□ -1.9
CD28P10747 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.2□□□□□ -1.9
CD28P10747 GSTM3P2-201ENST00000412746 530 ntBASIC3.2□□□□□ -1.9
CD28P10747 UBTFL3-201ENST00000418934 1024 ntBASIC3.2□□□□□ -1.9
CD28P10747 RBMY1KP-201ENST00000423480 476 ntBASIC3.2□□□□□ -1.9
CD28P10747 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.2□□□□□ -1.9
CD28P10747 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD28P10747 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.2□□□□□ -1.9
CD28P10747 ABCF2P2-201ENST00000450549 296 ntBASIC3.2□□□□□ -1.9
CD28P10747 AC133473.1-201ENST00000455173 299 ntBASIC3.2□□□□□ -1.9
CD28P10747 RPL23AP2-201ENST00000471227 466 ntBASIC3.2□□□□□ -1.9
CD28P10747 UBTFL6-201ENST00000477929 1024 ntBASIC3.2□□□□□ -1.9
CD28P10747 AP002812.1-201ENST00000495378 474 ntBASIC3.2□□□□□ -1.9
CD28P10747 RNU6-1004P-201ENST00000516584 111 ntBASIC3.2□□□□□ -1.9
CD28P10747 RNU6-1308P-201ENST00000516817 103 ntBASIC3.2□□□□□ -1.9
CD28P10747 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.2□□□□□ -1.9
CD28P10747 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD28P10747 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.2□□□□□ -1.9
CD28P10747 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.2□□□□□ -1.9
CD28P10747 AC023158.1-201ENST00000561632 1025 ntBASIC3.2□□□□□ -1.9
CD28P10747 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.2□□□□□ -1.9
CD28P10747 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.2□□□□□ -1.9
CD28P10747 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.2□□□□□ -1.9
CD28P10747 MIR7151-201ENST00000617477 60 ntBASIC3.2□□□□□ -1.9
CD28P10747 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.2□□□□□ -1.9
CD28P10747 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CD28P10747 MTND4P26-201ENST00000415971 1359 ntBASIC3.2□□□□□ -1.9
CD28P10747 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CD28P10747 AC016588.2-201ENST00000632484 3021 ntBASIC3.2□□□□□ -1.9
CD28P10747 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CD28P10747 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.2□□□□□ -1.9
CD28P10747 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CD28P10747 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD28P10747 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.19□□□□□ -1.9
CD28P10747 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms