Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC087385.1-201ENST00000475062 312 ntBASIC3.19□□□□□ -1.9
CTSDP07339 AL132838.2-201ENST00000492041 314 ntBASIC3.19□□□□□ -1.9
CTSDP07339 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.19□□□□□ -1.9
CTSDP07339 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.19□□□□□ -1.9
CTSDP07339 AC026784.1-201ENST00000507986 352 ntBASIC3.19□□□□□ -1.9
CTSDP07339 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSDP07339 HPRT1P1-201ENST00000509498 657 ntBASIC3.19□□□□□ -1.9
CTSDP07339 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.19□□□□□ -1.9
CTSDP07339 RNU6-1231P-201ENST00000517185 103 ntBASIC3.19□□□□□ -1.9
CTSDP07339 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.19□□□□□ -1.9
CTSDP07339 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.19□□□□□ -1.9
CTSDP07339 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTSDP07339 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSDP07339 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.19□□□□□ -1.9
CTSDP07339 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSDP07339 MIR4738-201ENST00000579134 87 ntBASIC3.19□□□□□ -1.9
CTSDP07339 AC023575.1-201ENST00000580510 358 ntBASIC3.19□□□□□ -1.9
CTSDP07339 AC119501.1-201ENST00000603646 475 ntBASIC3.19□□□□□ -1.9
CTSDP07339 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.19□□□□□ -1.9
CTSDP07339 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.19□□□□□ -1.9
CTSDP07339 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.19□□□□□ -1.9
CTSDP07339 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSDP07339 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSDP07339 AP002001.2-201ENST00000529025 1469 ntBASIC3.19□□□□□ -1.9
CTSDP07339 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.19□□□□□ -1.9
CTSDP07339 PRO1804-201ENST00000623780 2050 ntBASIC3.19□□□□□ -1.9
CTSDP07339 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CTSDP07339 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTSDP07339 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
CTSDP07339 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.18□□□□□ -1.9
CTSDP07339 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTSDP07339 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.18□□□□□ -1.9
CTSDP07339 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTSDP07339 AC005261.4-201ENST00000600047 1385 ntBASIC3.18□□□□□ -1.9
CTSDP07339 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.18□□□□□ -1.9
CTSDP07339 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CTSDP07339 RNU11-4P-201ENST00000391149 133 ntBASIC3.18□□□□□ -1.9
CTSDP07339 SNORA57.3-201ENST00000411095 141 ntBASIC3.18□□□□□ -1.9
CTSDP07339 TPT1P2-201ENST00000413105 503 ntBASIC3.18□□□□□ -1.9
CTSDP07339 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.18□□□□□ -1.9
CTSDP07339 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.18□□□□□ -1.9
CTSDP07339 RPS11P1-201ENST00000451072 473 ntBASIC3.18□□□□□ -1.9
CTSDP07339 AC009220.1-201ENST00000451614 275 ntBASIC3.18□□□□□ -1.9
CTSDP07339 HMGN2P7-201ENST00000456186 273 ntBASIC3.18□□□□□ -1.9
CTSDP07339 RPL21P11-201ENST00000461458 483 ntBASIC3.18□□□□□ -1.9
CTSDP07339 RPL7P48-201ENST00000461513 746 ntBASIC3.18□□□□□ -1.9
CTSDP07339 UQCRHP4-201ENST00000471686 272 ntBASIC3.18□□□□□ -1.9
CTSDP07339 AC105137.1-201ENST00000484355 562 ntBASIC3.18□□□□□ -1.9
CTSDP07339 AC041039.1-201ENST00000485656 536 ntBASIC3.18□□□□□ -1.9
CTSDP07339 AC108475.1-201ENST00000507880 950 ntBASIC3.18□□□□□ -1.9
CTSDP07339 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.18□□□□□ -1.9
CTSDP07339 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.18□□□□□ -1.9
CTSDP07339 IGKV2-23-201ENST00000518729 323 ntBASIC3.18□□□□□ -1.9
CTSDP07339 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTSDP07339 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.18□□□□□ -1.9
CTSDP07339 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTSDP07339 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTSDP07339 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.18□□□□□ -1.9
CTSDP07339 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.18□□□□□ -1.9
CTSDP07339 MIR3186-201ENST00000577404 85 ntBASIC3.18□□□□□ -1.9
CTSDP07339 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTSDP07339 KPNA2P3-201ENST00000584190 848 ntBASIC3.18□□□□□ -1.9
CTSDP07339 AC011477.5-201ENST00000586571 259 ntBASIC3.18□□□□□ -1.9
CTSDP07339 KLKP1-201ENST00000595979 403 ntBASIC3.18□□□□□ -1.9
CTSDP07339 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.18□□□□□ -1.9
CTSDP07339 AC103710.3-201ENST00000608157 948 ntBASIC3.18□□□□□ -1.9
CTSDP07339 AL445423.1-201ENST00000609941 536 ntBASIC3.18□□□□□ -1.9
CTSDP07339 AC023043.4-201ENST00000612081 449 ntBASIC3.18□□□□□ -1.9
CTSDP07339 AL592295.2-201ENST00000612578 206 ntBASIC3.18□□□□□ -1.9
CTSDP07339 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.18□□□□□ -1.9
CTSDP07339 MIR3653-201ENST00000625572 110 ntBASIC3.18□□□□□ -1.9
CTSDP07339 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.18□□□□□ -1.9
CTSDP07339 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CTSDP07339 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTSDP07339 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTSDP07339 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTSDP07339 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTSDP07339 CASC19-284ENST00000642142 1868 ntBASIC3.18□□□□□ -1.9
CTSDP07339 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTSDP07339 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.17□□□□□ -1.9
CTSDP07339 CCT8P1-201ENST00000413611 1657 ntBASIC3.17□□□□□ -1.9
CTSDP07339 PWAR6-201ENST00000552334 4618 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AC009229.4-201ENST00000623854 1947 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AC010329.2-201ENST00000595195 2737 ntBASIC3.17□□□□□ -1.9
CTSDP07339 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTSDP07339 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.17□□□□□ -1.9
CTSDP07339 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTSDP07339 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTSDP07339 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTSDP07339 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTSDP07339 RNU6-283P-201ENST00000364788 107 ntBASIC3.17□□□□□ -1.9
CTSDP07339 U1.1-201ENST00000384101 164 ntBASIC3.17□□□□□ -1.9
CTSDP07339 MIR141-201ENST00000384975 95 ntBASIC3.17□□□□□ -1.9
CTSDP07339 RNU6-328P-201ENST00000390887 106 ntBASIC3.17□□□□□ -1.9
CTSDP07339 OR6C69P-201ENST00000394268 893 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AC108032.1-201ENST00000416706 207 ntBASIC3.17□□□□□ -1.9
CTSDP07339 VN1R31P-201ENST00000417498 730 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.17□□□□□ -1.9
CTSDP07339 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.17□□□□□ -1.9
CTSDP07339 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms