Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LDLRP01130 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LDLRP01130 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LDLRP01130 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.5□□□□□ -1.69
LDLRP01130 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LDLRP01130 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LDLRP01130 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LDLRP01130 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
LDLRP01130 AC100871.1-201ENST00000507871 1456 ntBASIC4.49□□□□□ -1.69
LDLRP01130 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LDLRP01130 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LDLRP01130 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.49□□□□□ -1.69
LDLRP01130 DHX40P1-201ENST00000588725 1412 ntBASIC4.49□□□□□ -1.69
LDLRP01130 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LDLRP01130 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LDLRP01130 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LDLRP01130 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LDLRP01130 RNU5E-10P-201ENST00000363506 118 ntBASIC4.49□□□□□ -1.69
LDLRP01130 RNA5SP28-201ENST00000363841 119 ntBASIC4.49□□□□□ -1.69
LDLRP01130 ANAPC10P1-201ENST00000395991 556 ntBASIC4.49□□□□□ -1.69
LDLRP01130 RPL23AP59-201ENST00000399415 461 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AL357515.1-201ENST00000402967 542 ntBASIC4.49□□□□□ -1.69
LDLRP01130 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LDLRP01130 VN1R51P-201ENST00000411675 945 ntBASIC4.49□□□□□ -1.69
LDLRP01130 MTCO2P8-201ENST00000412213 658 ntBASIC4.49□□□□□ -1.69
LDLRP01130 MTND2P16-201ENST00000419987 799 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.49□□□□□ -1.69
LDLRP01130 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.49□□□□□ -1.69
LDLRP01130 Z74021.1-201ENST00000423610 407 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.49□□□□□ -1.69
LDLRP01130 KCTD10P1-201ENST00000434203 625 ntBASIC4.49□□□□□ -1.69
LDLRP01130 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.49□□□□□ -1.69
LDLRP01130 AC092170.1-201ENST00000440211 356 ntBASIC4.49□□□□□ -1.69
LDLRP01130 Z77249.1-201ENST00000444622 1175 ntBASIC4.49□□□□□ -1.69
LDLRP01130 GEMIN8P3-201ENST00000445417 720 ntBASIC4.49□□□□□ -1.69
LDLRP01130 EIF2S2P2-201ENST00000447161 982 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.49□□□□□ -1.69
LDLRP01130 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.49□□□□□ -1.69
LDLRP01130 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LDLRP01130 DUXAP8-207ENST00000456786 622 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AC108022.1-201ENST00000493466 478 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AC083829.1-201ENST00000503756 657 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.49□□□□□ -1.69
LDLRP01130 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.49□□□□□ -1.69
LDLRP01130 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.49□□□□□ -1.69
LDLRP01130 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.49□□□□□ -1.69
LDLRP01130 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LDLRP01130 OR7E13P-201ENST00000526052 910 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AP002812.4-201ENST00000532139 286 ntBASIC4.49□□□□□ -1.69
LDLRP01130 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.49□□□□□ -1.69
LDLRP01130 FKBP1BP1-201ENST00000553366 325 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.49□□□□□ -1.69
LDLRP01130 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.49□□□□□ -1.69
LDLRP01130 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.49□□□□□ -1.69
LDLRP01130 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.49□□□□□ -1.69
LDLRP01130 ZNF971P-201ENST00000562068 1249 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AC027104.1-201ENST00000563702 681 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AGGF1P5-201ENST00000567900 919 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.49□□□□□ -1.69
LDLRP01130 MIR3160-1-201ENST00000577972 85 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.49□□□□□ -1.69
LDLRP01130 AP002906.1-201ENST00000603405 233 ntBASIC4.49□□□□□ -1.69
LDLRP01130 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.49□□□□□ -1.69
LDLRP01130 AC005377.1-201ENST00000605126 456 ntBASIC4.49□□□□□ -1.69
LDLRP01130 Z99289.3-201ENST00000605586 594 ntBASIC4.49□□□□□ -1.69
LDLRP01130 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.49□□□□□ -1.69
LDLRP01130 AC093673.2-201ENST00000609674 331 ntBASIC4.49□□□□□ -1.69
LDLRP01130 DUXAP10-204ENST00000612052 616 ntBASIC4.49□□□□□ -1.69
LDLRP01130 AC009159.2-201ENST00000617603 606 ntBASIC4.49□□□□□ -1.69
LDLRP01130 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LDLRP01130 Z95327.2-201ENST00000414579 1873 ntBASIC4.49□□□□□ -1.69
LDLRP01130 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
LDLRP01130 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LDLRP01130 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LDLRP01130 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.49□□□□□ -1.69
LDLRP01130 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
LDLRP01130 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LDLRP01130 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LDLRP01130 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LDLRP01130 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.48□□□□□ -1.69
LDLRP01130 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LDLRP01130 OR4K15-201ENST00000305051 1216 ntBASIC4.48□□□□□ -1.69
LDLRP01130 OR56B2P-201ENST00000317102 954 ntBASIC4.48□□□□□ -1.69
LDLRP01130 RNU6-932P-201ENST00000391108 106 ntBASIC4.48□□□□□ -1.69
LDLRP01130 U3.22-201ENST00000391120 215 ntBASIC4.48□□□□□ -1.69
LDLRP01130 SNORA48.7-201ENST00000391302 135 ntBASIC4.48□□□□□ -1.69
LDLRP01130 MCTS2P-201ENST00000394552 546 ntBASIC4.48□□□□□ -1.69
LDLRP01130 ARL4AP5-201ENST00000404372 599 ntBASIC4.48□□□□□ -1.69
LDLRP01130 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.48□□□□□ -1.69
LDLRP01130 MIR1303-201ENST00000408625 86 ntBASIC4.48□□□□□ -1.69
LDLRP01130 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.48□□□□□ -1.69
LDLRP01130 RNU6-603P-201ENST00000411403 107 ntBASIC4.48□□□□□ -1.69
LDLRP01130 AC092638.1-201ENST00000411966 1275 ntBASIC4.48□□□□□ -1.69
LDLRP01130 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LDLRP01130 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.48□□□□□ -1.69
LDLRP01130 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.48□□□□□ -1.69
LDLRP01130 AC093414.1-201ENST00000434712 514 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms