Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFBP01127 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.41□□□□□ -1.7
PDGFBP01127 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFBP01127 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFBP01127 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.41□□□□□ -1.7
PDGFBP01127 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFBP01127 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFBP01127 AC011471.1-201ENST00000585766 187 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 AC018618.2-201ENST00000604770 446 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.41□□□□□ -1.7
PDGFBP01127 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFBP01127 AC015804.1-201ENST00000622935 435 ntBASIC4.41□□□□□ -1.7
PDGFBP01127 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFBP01127 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFBP01127 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFBP01127 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.41□□□□□ -1.7
PDGFBP01127 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFBP01127 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PDGFBP01127 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.41□□□□□ -1.7
PDGFBP01127 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFBP01127 AP001642.1-201ENST00000624727 2117 ntBASIC4.4□□□□□ -1.7
PDGFBP01127 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PDGFBP01127 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PDGFBP01127 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PDGFBP01127 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PDGFBP01127 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.4□□□□□ -1.7
PDGFBP01127 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFBP01127 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFBP01127 MIR142-201ENST00000384835 87 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 ENSAP1-201ENST00000392855 326 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 PCNPP4-201ENST00000414817 517 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AC108032.1-201ENST00000416706 207 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AL157831.1-201ENST00000426134 473 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 DYNLL1P7-201ENST00000429273 258 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AC091286.1-201ENST00000431233 461 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 CEACAMP1-201ENST00000434624 1035 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AC004938.1-201ENST00000438468 308 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFBP01127 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFBP01127 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFBP01127 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFBP01127 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFBP01127 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFBP01127 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.4□□□□□ -1.71
PDGFBP01127 AC004923.2-201ENST00000529649 369 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AC025260.1-201ENST00000548858 430 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.4□□□□□ -1.71
PDGFBP01127 OR4U1P-201ENST00000554958 912 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
PDGFBP01127 AL049830.4-201ENST00000555149 351 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AL121594.4-201ENST00000556211 1196 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AC040958.1-201ENST00000561102 201 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 LINC00557-201ENST00000563184 1279 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.4□□□□□ -1.71
PDGFBP01127 PCNAP1-202ENST00000595299 752 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AC115621.1-201ENST00000604653 858 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AC006946.3-201ENST00000609791 756 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AC019176.2-201ENST00000611579 315 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 AC090617.9-201ENST00000623751 147 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PDGFBP01127 AC009093.8-201ENST00000641769 292 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
PDGFBP01127 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDGFBP01127 DDX18P5-201ENST00000534547 1306 ntBASIC4.4□□□□□ -1.71
PDGFBP01127 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.4□□□□□ -1.71
PDGFBP01127 AC016588.2-201ENST00000632484 3021 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFBP01127 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFBP01127 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFBP01127 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFBP01127 AL592182.3-201ENST00000642132 3304 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PDGFBP01127 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PDGFBP01127 AC234782.4-201ENST00000417646 1048 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.39□□□□□ -1.71
PDGFBP01127 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 RPL7P29-201ENST00000437151 728 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.39□□□□□ -1.71
PDGFBP01127 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFBP01127 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFBP01127 RPL23AP23-201ENST00000452590 471 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 AC108729.2-201ENST00000476543 840 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.39□□□□□ -1.71
PDGFBP01127 ATP1B1P1-201ENST00000509767 915 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 AC025768.1-201ENST00000510057 267 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.39□□□□□ -1.71
PDGFBP01127 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.39□□□□□ -1.71
PDGFBP01127 RN7SKP82-201ENST00000516786 223 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
PDGFBP01127 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.39□□□□□ -1.71
PDGFBP01127 RPL23AP53-201ENST00000521854 457 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PDGFBP01127 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.39□□□□□ -1.71
PDGFBP01127 AL161713.1-201ENST00000555538 145 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.39□□□□□ -1.71
PDGFBP01127 AC233266.2-201ENST00000567067 528 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 MIR4458-201ENST00000578872 75 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 ADAD1P2-201ENST00000588476 646 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 AC011374.2-201ENST00000607135 526 ntBASIC4.39□□□□□ -1.71
PDGFBP01127 AL159169.3-201ENST00000608871 561 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms