Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC7.39□□□□□ -1.23
RNF40O75150 CARSP2-201ENST00000520688 277 ntBASIC7.39□□□□□ -1.23
RNF40O75150 AL031846.1-201ENST00000560933 314 ntBASIC7.39□□□□□ -1.23
RNF40O75150 AC010287.1-201ENST00000566916 357 ntBASIC7.39□□□□□ -1.23
RNF40O75150 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RNF40O75150 PPIAP14-201ENST00000577627 496 ntBASIC7.39□□□□□ -1.23
RNF40O75150 OR4K8P-201ENST00000578842 1048 ntBASIC7.39□□□□□ -1.23
RNF40O75150 AC138207.8-204ENST00000579588 527 ntBASIC7.39□□□□□ -1.23
RNF40O75150 MIR3128-201ENST00000581957 66 ntBASIC7.39□□□□□ -1.23
RNF40O75150 AC023043.2-201ENST00000589678 1026 ntBASIC7.39□□□□□ -1.23
RNF40O75150 GLUD1P4-201ENST00000590914 418 ntBASIC7.39□□□□□ -1.23
RNF40O75150 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF40O75150 AC011626.1-201ENST00000604710 562 ntBASIC7.39□□□□□ -1.23
RNF40O75150 AC096772.1-201ENST00000609146 564 ntBASIC7.39□□□□□ -1.23
RNF40O75150 MIR6780B-201ENST00000610307 79 ntBASIC7.39□□□□□ -1.23
RNF40O75150 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.39□□□□□ -1.23
RNF40O75150 AC011890.2-201ENST00000613393 294 ntBASIC7.39□□□□□ -1.23
RNF40O75150 AC243312.2-201ENST00000623340 601 ntBASIC7.39□□□□□ -1.23
RNF40O75150 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF40O75150 AL732372.2-225ENST00000642124 456 ntBASIC7.39□□□□□ -1.23
RNF40O75150 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF40O75150 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF40O75150 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF40O75150 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF40O75150 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF40O75150 AC005618.1-201ENST00000606901 3148 ntBASIC7.38□□□□□ -1.23
RNF40O75150 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
RNF40O75150 AP000547.3-204ENST00000588548 2523 ntBASIC7.38□□□□□ -1.23
RNF40O75150 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 PARP4P1-201ENST00000435945 2337 ntBASIC7.38□□□□□ -1.23
RNF40O75150 HDAC1P2-201ENST00000453661 1398 ntBASIC7.38□□□□□ -1.23
RNF40O75150 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF40O75150 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RNF40O75150 RNU6-1252P-201ENST00000363054 104 ntBASIC7.38□□□□□ -1.23
RNF40O75150 RNU6-770P-201ENST00000363929 105 ntBASIC7.38□□□□□ -1.23
RNF40O75150 Y_RNA.389-201ENST00000383924 113 ntBASIC7.38□□□□□ -1.23
RNF40O75150 RNU6-432P-201ENST00000384196 109 ntBASIC7.38□□□□□ -1.23
RNF40O75150 RNA5SP53-201ENST00000391299 120 ntBASIC7.38□□□□□ -1.23
RNF40O75150 MORN2-203ENST00000409131 544 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF40O75150 RNU6-272P-201ENST00000411028 104 ntBASIC7.38□□□□□ -1.23
RNF40O75150 OR6E1P-201ENST00000414424 923 ntBASIC7.38□□□□□ -1.23
RNF40O75150 MTCO3P19-201ENST00000415864 321 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.38□□□□□ -1.23
RNF40O75150 Z82198.3-201ENST00000421145 199 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AL031663.1-201ENST00000437445 219 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.38□□□□□ -1.23
RNF40O75150 AC073909.1-201ENST00000447112 999 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AC020550.1-201ENST00000447385 163 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 AL034399.1-201ENST00000451535 380 ntBASIC7.38□□□□□ -1.23
RNF40O75150 RPL31P11-202ENST00000454082 372 ntBASIC7.38□□□□□ -1.23
RNF40O75150 RN7SL372P-201ENST00000461982 298 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AC091982.1-202ENST00000473923 343 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AC011005.3-201ENST00000491624 395 ntBASIC7.38□□□□□ -1.23
RNF40O75150 RN7SL306P-201ENST00000492941 296 ntBASIC7.38□□□□□ -1.23
RNF40O75150 Y_RNA.654-201ENST00000497848 106 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AC010350.1-201ENST00000504908 231 ntBASIC7.38□□□□□ -1.23
RNF40O75150 SLC25A15P5-201ENST00000508033 253 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF40O75150 HMGN1P9-201ENST00000515212 298 ntBASIC7.38□□□□□ -1.23
RNF40O75150 RNU6-1023P-201ENST00000516137 106 ntBASIC7.38□□□□□ -1.23
RNF40O75150 RNU6-256P-201ENST00000516747 97 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.38□□□□□ -1.23
RNF40O75150 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF40O75150 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC7.38□□□□□ -1.23
RNF40O75150 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.38□□□□□ -1.23
RNF40O75150 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC7.38□□□□□ -1.23
RNF40O75150 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC7.38□□□□□ -1.23
RNF40O75150 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF40O75150 SULT1C2P1-202ENST00000562418 459 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC7.38□□□□□ -1.23
RNF40O75150 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF40O75150 RPS27AP19-201ENST00000597285 458 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.38□□□□□ -1.23
RNF40O75150 AL355297.3-201ENST00000604082 446 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF40O75150 AC097381.3-201ENST00000608962 462 ntBASIC7.38□□□□□ -1.23
RNF40O75150 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.38□□□□□ -1.23
RNF40O75150 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF40O75150 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.38□□□□□ -1.23
RNF40O75150 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
RNF40O75150 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF40O75150 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF40O75150 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms