Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN2BO60939 IGBP1P5-201ENST00000507524 1000 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN2BO60939 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN2BO60939 SEC11B-201ENST00000518383 499 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN2BO60939 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.8□□□□□ -1.8
SCN2BO60939 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN2BO60939 AC025627.2-201ENST00000576220 160 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 MIR4284-201ENST00000578924 81 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 AP001180.3-201ENST00000582221 145 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN2BO60939 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SCN2BO60939 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN2BO60939 UBE3AP2-201ENST00000429033 2259 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.8□□□□□ -1.8
SCN2BO60939 IPO8P1-201ENST00000455509 3109 ntBASIC3.8□□□□□ -1.8
SCN2BO60939 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN2BO60939 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SCN2BO60939 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN2BO60939 CCT8P1-201ENST00000413611 1657 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
SCN2BO60939 RNU1-32P-201ENST00000363937 159 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.79□□□□□ -1.8
SCN2BO60939 RN7SKP33-201ENST00000410942 340 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 RPL23AP26-201ENST00000412728 464 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 AMD1P2-201ENST00000412936 992 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 RPL23AP38-201ENST00000423801 469 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 AC087650.1-201ENST00000431445 468 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCN2BO60939 RPS4XP4-201ENST00000443195 763 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 VN1R48P-201ENST00000448149 1036 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.79□□□□□ -1.8
SCN2BO60939 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN2BO60939 SNORD108-201ENST00000459332 71 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 AC092691.2-201ENST00000461787 803 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 AC069499.1-201ENST00000489433 509 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 RN7SL604P-201ENST00000492589 296 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 AC106872.2-201ENST00000494303 480 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 RPS27AP13-201ENST00000498403 237 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 SNX5P1-201ENST00000505757 1041 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN2BO60939 CCNHP1-201ENST00000513311 678 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 MIR2114-201ENST00000516645 80 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 RNA5SP309-201ENST00000516670 106 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 AC008083.2-201ENST00000546707 476 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.79□□□□□ -1.8
SCN2BO60939 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.79□□□□□ -1.8
SCN2BO60939 RN7SL600P-201ENST00000581811 299 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 AL451044.1-201ENST00000604867 238 ntBASIC3.79□□□□□ -1.8
SCN2BO60939 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN2BO60939 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN2BO60939 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN2BO60939 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN2BO60939 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SCN2BO60939 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN2BO60939 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SCN2BO60939 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN2BO60939 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCN2BO60939 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.79□□□□□ -1.8
SCN2BO60939 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN2BO60939 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN2BO60939 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN2BO60939 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN2BO60939 SNORA60-201ENST00000362396 134 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SCN2BO60939 AL138878.1-201ENST00000405131 347 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN2BO60939 AC016397.1-201ENST00000412463 242 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 AC096638.2-201ENST00000434965 711 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN2BO60939 BTG3P1-201ENST00000435859 716 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN2BO60939 EIF2S2P2-201ENST00000447161 982 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN2BO60939 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN2BO60939 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN2BO60939 AC022616.2-201ENST00000523185 300 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SCN2BO60939 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN2BO60939 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.78□□□□□ -1.8
SCN2BO60939 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.78□□□□□ -1.8
SCN2BO60939 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SCN2BO60939 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.78□□□□□ -1.8
SCN2BO60939 AC141257.3-201ENST00000572906 215 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 MIR4700-201ENST00000578311 74 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 MIR3138-201ENST00000585238 82 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 AL390816.3-201ENST00000604527 1066 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN2BO60939 MIR8059-201ENST00000620427 81 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 AC020763.5-201ENST00000623298 430 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 AC124312.6-202ENST00000623624 418 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN2BO60939 MIR7641-1-201ENST00000627518 61 ntBASIC3.78□□□□□ -1.8
SCN2BO60939 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SCN2BO60939 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN2BO60939 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.78□□□□□ -1.8
SCN2BO60939 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.78□□□□□ -1.8
SCN2BO60939 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.78□□□□□ -1.81
SCN2BO60939 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms