Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MTND1P30-201ENST00000441241 901 ntBASIC5.02□□□□□ -1.61
PROM1O43490 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.02□□□□□ -1.61
PROM1O43490 EIF4A1P11-201ENST00000451239 222 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AL645937.3-201ENST00000453647 936 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AC005532.2-201ENST00000467154 373 ntBASIC5.02□□□□□ -1.61
PROM1O43490 SETP11-201ENST00000473027 690 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.02□□□□□ -1.61
PROM1O43490 AC112198.1-201ENST00000505369 1220 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AC113430.1-201ENST00000506872 718 ntBASIC5.02□□□□□ -1.61
PROM1O43490 HIGD1AP14-201ENST00000507617 282 ntBASIC5.02□□□□□ -1.61
PROM1O43490 NDUFB5P1-201ENST00000508134 564 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AC022447.1-201ENST00000515358 464 ntBASIC5.02□□□□□ -1.61
PROM1O43490 RNU6-416P-201ENST00000516265 103 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AC106038.2-201ENST00000520706 568 ntBASIC5.02□□□□□ -1.61
PROM1O43490 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 AC008083.2-201ENST00000546707 476 ntBASIC5.02□□□□□ -1.61
PROM1O43490 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.02□□□□□ -1.61
PROM1O43490 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.02□□□□□ -1.61
PROM1O43490 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.02□□□□□ -1.61
PROM1O43490 ROCK1P1-201ENST00000573767 549 ntBASIC5.02□□□□□ -1.61
PROM1O43490 RN7SL290P-201ENST00000578661 300 ntBASIC5.02□□□□□ -1.61
PROM1O43490 MIR4666A-201ENST00000580160 79 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
PROM1O43490 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.02□□□□□ -1.61
PROM1O43490 AC018714.1-201ENST00000605028 208 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AL391497.1-201ENST00000608671 547 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.02□□□□□ -1.61
PROM1O43490 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.02□□□□□ -1.61
PROM1O43490 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AL136981.2-201ENST00000617319 734 ntBASIC5.02□□□□□ -1.61
PROM1O43490 MIR6837-201ENST00000620884 64 ntBASIC5.02□□□□□ -1.61
PROM1O43490 AC127502.3-201ENST00000636170 1206 ntBASIC5.02□□□□□ -1.61
PROM1O43490 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 MUC2-202ENST00000613187 4845 ntBASIC5.02□□□□□ -1.61
PROM1O43490 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.02□□□□□ -1.61
PROM1O43490 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 AL353743.4-201ENST00000422653 1547 ntBASIC5.02□□□□□ -1.61
PROM1O43490 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.02□□□□□ -1.61
PROM1O43490 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PROM1O43490 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PROM1O43490 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PROM1O43490 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PROM1O43490 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.01□□□□□ -1.61
PROM1O43490 AC109315.1-201ENST00000584143 1347 ntBASIC5.01□□□□□ -1.61
PROM1O43490 OR55B1P-203ENST00000641518 2602 ntBASIC5.01□□□□□ -1.61
PROM1O43490 PCAT14-202ENST00000627127 3935 ntBASIC5.01□□□□□ -1.61
PROM1O43490 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
PROM1O43490 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.01□□□□□ -1.61
PROM1O43490 OR9G4-201ENST00000302957 984 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AL672167.1-206ENST00000356293 943 ntBASIC5.01□□□□□ -1.61
PROM1O43490 RNA5SP183-201ENST00000362452 119 ntBASIC5.01□□□□□ -1.61
PROM1O43490 RN7SKP153-201ENST00000365026 316 ntBASIC5.01□□□□□ -1.61
PROM1O43490 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PROM1O43490 MIR223-201ENST00000385204 110 ntBASIC5.01□□□□□ -1.61
PROM1O43490 SNORA11C-201ENST00000408532 129 ntBASIC5.01□□□□□ -1.61
PROM1O43490 MIR1303-201ENST00000408625 86 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AL161449.1-201ENST00000414531 1199 ntBASIC5.01□□□□□ -1.61
PROM1O43490 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AC048351.1-201ENST00000420064 602 ntBASIC5.01□□□□□ -1.61
PROM1O43490 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.01□□□□□ -1.61
PROM1O43490 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.01□□□□□ -1.61
PROM1O43490 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.01□□□□□ -1.61
PROM1O43490 AC093155.1-201ENST00000440164 826 ntBASIC5.01□□□□□ -1.61
PROM1O43490 MTND1P1-201ENST00000445453 368 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.01□□□□□ -1.61
PROM1O43490 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.01□□□□□ -1.61
PROM1O43490 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.01□□□□□ -1.61
PROM1O43490 AC104634.1-201ENST00000452720 462 ntBASIC5.01□□□□□ -1.61
PROM1O43490 KATNBL1P6-201ENST00000453433 915 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.01□□□□□ -1.61
PROM1O43490 RNU7-27P-201ENST00000459281 62 ntBASIC5.01□□□□□ -1.61
PROM1O43490 RPL7P6-201ENST00000480903 738 ntBASIC5.01□□□□□ -1.61
PROM1O43490 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.01□□□□□ -1.61
PROM1O43490 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.01□□□□□ -1.61
PROM1O43490 LTV1P1-201ENST00000510683 1237 ntBASIC5.01□□□□□ -1.61
PROM1O43490 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.01□□□□□ -1.61
PROM1O43490 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.01□□□□□ -1.61
PROM1O43490 RNU6-941P-201ENST00000516346 108 ntBASIC5.01□□□□□ -1.61
PROM1O43490 RNU6-720P-201ENST00000516363 108 ntBASIC5.01□□□□□ -1.61
PROM1O43490 CDH12P4-201ENST00000517835 295 ntBASIC5.01□□□□□ -1.61
PROM1O43490 CDH12P3-201ENST00000517935 295 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.01□□□□□ -1.61
PROM1O43490 CDH12P1-201ENST00000518435 295 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AC087808.1-201ENST00000520501 361 ntBASIC5.01□□□□□ -1.61
PROM1O43490 SMARCE1P4-201ENST00000523647 241 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AP002812.4-201ENST00000532139 286 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.01□□□□□ -1.61
PROM1O43490 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.01□□□□□ -1.61
PROM1O43490 PCNPP1-201ENST00000552501 511 ntBASIC5.01□□□□□ -1.61
PROM1O43490 POLR2KP1-201ENST00000553226 168 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AC127381.1-201ENST00000555979 939 ntBASIC5.01□□□□□ -1.61
PROM1O43490 RPL10P14-201ENST00000565265 298 ntBASIC5.01□□□□□ -1.61
PROM1O43490 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms